RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MKRN2Q9H000 416 aaKnown RBP13.69□□□□□ -0.22
SGCA-201ENST00000262018 CPNE5Q9HCH3 593 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 DMAP1Q9NPF5 467 aaPredicted RBP13.69□□□□□ -0.22
SGCA-201ENST00000262018 ST7Q9NRC1 585 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 METTL5Q9NRN9 209 aaKnown RBP13.69□□□□□ -0.22
SGCA-201ENST00000262018 KRT82Q9NSB4 513 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 STON1Q9Y6Q2 735 aa13.69□□□□□ -0.22
SGCA-201ENST00000262018 F8VP50 259 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 COCHO43405 550 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 AP1G2O75843 785 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 NTRK1P04629 796 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 IRF1P10914 325 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 SCNN1AP37088 669 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 TMPRSS3P57727 454 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 VSNL1P62760 191 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 PPP2R5EQ16537 467 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 BROXQ5VW32 411 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 OR6B2Q6IFH4 312 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 AADACL2Q6P093 401 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 TMCO3Q6UWJ1 677 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 FAM124AQ86V42 546 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 CACUL1Q86Y37 369 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 SLC13A5Q86YT5 568 aaPredicted RBP13.68□□□□□ -0.22
SGCA-201ENST00000262018 ZDHHC17Q8IUH5 632 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 KATNAL2Q8IYT4 538 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 WBP2Q969T9 261 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 SIPA1Q96FS4 1042 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 HSFY1Q96LI6 401 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 KRT12Q99456 494 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 BBS2Q9BXC9 721 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 CSNK1G1Q9HCP0 422 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
SGCA-201ENST00000262018 XPO1O14980 1071 aaKnown RBP13.67□□□□□ -0.22
SGCA-201ENST00000262018 CACNG3O60359 315 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 GABBR2O75899 941 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 LDOC1O95751 146 aaPredicted RBP13.67□□□□□ -0.22
SGCA-201ENST00000262018 ACADMP11310 421 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 CDK4P11802 303 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 TYRP14679 529 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 PSMA2P25787 234 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 ACADSBP45954 432 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 PLA2G4AP47712 749 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 RGS7P49802 495 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 SLC8A3P57103 927 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 TBC1D25Q3MII6 688 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 COLEC12Q5KU26 742 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
SGCA-201ENST00000262018 OLFML1Q6UWY5 402 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 GATAD2AQ86YP4 633 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 TMPRSS6Q8IU80 811 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 PRCCQ92733 491 aaPredicted RBP13.67□□□□□ -0.22
SGCA-201ENST00000262018 CNDP2Q96KP4 475 aaKnown RBP13.67□□□□□ -0.22
SGCA-201ENST00000262018 DUSP16Q9BY84 665 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 TM9SF3Q9HD45 589 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 PNPLA8Q9NP80 782 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
SGCA-201ENST00000262018 TMEM131Q92545 1883 aa13.67□□□□□ -0.22
SGCA-201ENST00000262018 GOLGA6L10A0A0M3HER8 536 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 PAPSS1O43252 624 aaPredicted RBP13.66□□□□□ -0.22
SGCA-201ENST00000262018 C1SP09871 688 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 GRIA4P48058 902 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 DGKGP49619 791 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 ZNF143P52747 638 aaPredicted RBP13.66□□□□□ -0.22
SGCA-201ENST00000262018 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 SLC6A3Q01959 620 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 TPGS1Q6ZTW0 290 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 CLEC20AQ6ZU45 233 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 POLNQ7Z5Q5 900 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 ZNF248Q8NDW4 579 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 EXD1Q8NHP7 514 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 MED8Q96G25 268 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 PKNOX2Q96KN3 472 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 SMOQ99835 787 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 TRIM4Q9C037 500 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 C6orf106Q9H6K1 298 aaPredicted RBP13.66□□□□□ -0.22
SGCA-201ENST00000262018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.22
SGCA-201ENST00000262018 STIM2Q9P246 746 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 IL17BQ9UHF5 180 aa13.66□□□□□ -0.22
SGCA-201ENST00000262018 C2CD4BA6NLJ0 364 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 BHMG1C9JSJ3 638 aaPredicted RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 RAD51CO43502 376 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 SYNCRIPO60506 623 aaKnown RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 ZRANB2O95218 330 aaKnown RBP eCLIP13.65□□□□□ -0.22
SGCA-201ENST00000262018 IGLV3-19P01714 112 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 GPD1P21695 349 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 TNFRSF8P28908 595 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 CTSKP43235 329 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 UCNP55089 124 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 SIX1Q15475 284 aaPredicted RBP13.65□□□□□ -0.22
SGCA-201ENST00000262018 CYP1B1Q16678 543 aa13.65□□□□□ -0.22
SGCA-201ENST00000262018 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms