RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ACVR2BQ13705 512 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CDONQ4KMG0 1287 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 FRMD5Q7Z6J6 570 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 COMMD7Q86VX2 200 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CCDC185Q8N715 623 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF420Q8TAQ5 688 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PUS7LQ9H0K6 701 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 OCEL1Q9H607 264 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 TRMT13Q9NUP7 481 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PADI4Q9UM07 663 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ERGIC3Q9Y282 383 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 HSPB11Q9Y547 144 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 FCHO1O14526 889 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 MAGEC1O60732 1142 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CLPXO76031 633 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 EYA4O95677 639 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 HMGCRP04035 888 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 TNNI3P19429 210 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 FEN1P39748 380 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ADCY7P51828 1080 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 AP2S1P53680 142 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 TAF5Q15542 800 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CDKL4Q5MAI5 379 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 GPIHBP1Q8IV16 184 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 FBXL13Q8NEE6 735 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 KBTBD8Q8NFY9 601 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF347Q96SE7 839 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PNPLA8Q9NP80 782 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 AKAP7Q9P0M2 348 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 B3GNT3Q9Y2A9 372 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 MYO1GB0I1T2 1018 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 USP17L12C9JPN9 530 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 USP17L21D6R901 530 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 H0Y858 1186 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 AURKAO14965 403 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 KHDRBS3O75525 346 aaKnown RBP6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 CNTFP26441 200 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 PBLDP30039 288 aaPredicted RBP6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 AXLP30530 894 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 CAPGP40121 348 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 OMPP47874 163 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 GLO1Q04760 184 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 CYP2A13Q16696 494 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 PAN3Q58A45 887 aaKnown RBP6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 PTRHD1Q6GMV3 140 aaKnown RBP6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 ULK3Q6PHR2 472 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 XKR5Q6UX68 686 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 DGKHQ86XP1 1220 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 DHRSXQ8N5I4 330 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 C11orf65Q8NCR3 313 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 AKR7LQ8NHP1 331 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 ZHX1-C8orf76Q96EF9 292 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 SEMA6AQ9H2E6 1030 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 SAYSD1Q9NPB0 183 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 DPP7Q9UHL4 492 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 CYB5R1Q9UHQ9 305 aa6.84□□□□□ -1.32
PDGFRA-201ENST00000257290 TRIM38O00635 465 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 AIM2O14862 343 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MICAL2O94851 1124 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PDGFAP04085 211 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GNAZP19086 355 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MAGEA6P43360 314 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PRKAA2P54646 552 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PPP4CP60510 307 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 BTN3A2P78410 334 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 POU6F2P78424 691 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KIZQ2M2Z5 673 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 BTBD16Q32M84 506 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LRIT3Q3SXY7 679 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 RESP18Q5W5W9 173 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LPCAT4Q643R3 524 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LRRTM3Q86VH5 581 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PAPOLGQ9BWT3 736 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 APOL6Q9BWW8 343 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SIAEQ9HAT2 523 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FBRSL1Q9HCM7 1045 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LAMP5Q9UJQ1 280 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KCNIP3Q9Y2W7 256 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PCDHGA8Q9Y5G5 932 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CDK2AP1O14519 115 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 TEX33O43247 280 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ZBTB48P10074 688 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FCGR1AP12314 374 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MAPK3P27361 379 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PIK3R1P27986 724 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 HK3P52790 923 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ADAM15Q13444 863 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DNASE1L3Q13609 305 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DOC2AQ14183 400 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DLGAP5Q15398 846 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FASTKD1Q53R41 847 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 UBXN11Q5T124 520 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SLFN12LQ6IEE8 588 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CRTC3Q6UUV7 619 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CFAP77Q6ZQR2 320 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DTX3Q8N9I9 347 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 STOML3Q8TAV4 291 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms