RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ARID1BQ8NFD5 2236 aaPredicted RBP21.51■■□□□ 1.03
NEDD8-201ENST00000250495 GFPT2O94808 682 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 GLDCP23378 1020 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 ATP11AP98196 1134 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 CDR2Q01850 454 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 ILKQ13418 452 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 C19orf48Q6RUI8 117 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 DPY19L3Q6ZPD9 716 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 KANSL1Q7Z3B3 1105 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 TSC1Q92574 1164 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 GANQ9H2C0 597 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 TNKS2Q9H2K2 1166 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 RETREG1Q9H6L5 497 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 ATP13A1Q9HD20 1204 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 METTL5Q9NRN9 209 aaKnown RBP21.51■■□□□ 1.03
NEDD8-201ENST00000250495 ZNF212Q9UDV6 495 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 RAXQ9Y2V3 346 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 DAAM1Q9Y4D1 1078 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 ZFYVE26Q68DK2 2539 aa21.51■■□□□ 1.03
NEDD8-201ENST00000250495 ZMPSTE24O75844 475 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 PCDH8O95206 1070 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 CYP1A1P04798 512 aaPredicted RBP21.5■■□□□ 1.03
NEDD8-201ENST00000250495 THEGLP0DJG4 465 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 CKMT2P17540 419 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 MMP8P22894 467 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 AKT2P31751 481 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 ACADVLP49748 655 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 SERPINH1P50454 418 aaKnown RBP21.5■■□□□ 1.03
NEDD8-201ENST00000250495 POLR2FP61218 127 aaKnown RBP21.5■■□□□ 1.03
NEDD8-201ENST00000250495 GNA12Q03113 381 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 FKBP15Q5T1M5 1219 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 ARTNQ5T4W7 220 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 PCDH20Q8N6Y1 951 aaKnown RBP21.5■■□□□ 1.03
NEDD8-201ENST00000250495 EMC1Q8N766 993 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 TMEM145Q8NBT3 493 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 GRIN3AQ8TCU5 1115 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 SLC20A1Q8WUM9 679 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 KLK6Q92876 244 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 OR12D3Q9UGF7 316 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 NOCTQ9UK39 431 aaKnown RBP21.5■■□□□ 1.03
NEDD8-201ENST00000250495 CA5BQ9Y2D0 317 aa21.5■■□□□ 1.03
NEDD8-201ENST00000250495 CXorf51AA0A1B0GTR3 108 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 ZNF821O75541 412 aaPredicted RBP21.49■■□□□ 1.03
NEDD8-201ENST00000250495 LEFTY1O75610 366 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 PRLRP16471 622 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 HNRNPA2B1P22626 353 aaKnown RBP21.49■■□□□ 1.03
NEDD8-201ENST00000250495 SDC4P31431 198 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 ADRA1BP35368 520 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 SOX5P35711 763 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 ETFBP38117 255 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 DNA2P51530 1060 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 NRG1Q02297 640 aaPredicted RBP21.49■■□□□ 1.03
NEDD8-201ENST00000250495 ZNF284Q2VY69 593 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 CARD16Q5EG05 197 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 TRIM72Q6ZMU5 477 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 DRC7Q8IY82 874 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 FAM174AQ8TBP5 190 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 RXFP2Q8WXD0 754 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 HEPHQ9BQS7 1158 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 KLHL11Q9NVR0 708 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 WASF2Q9Y6W5 498 aa21.49■■□□□ 1.03
NEDD8-201ENST00000250495 DSPP15924 2871 aaKnown RBP21.48■■□□□ 1.03
NEDD8-201ENST00000250495 NEK3P51956 506 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 ARF5P84085 180 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 FMO1Q01740 532 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 KRT31Q15323 416 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 CDO1Q16878 200 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 CCDC14Q49A88 953 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 HS1BP3Q53T59 392 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 CDKAL1Q5VV42 579 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 FEM1CQ96JP0 617 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 MYOCQ99972 504 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 OSBPL2Q9H1P3 480 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 NLRC4Q9NPP4 1024 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 SCUBE2Q9NQ36 999 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 FAM207AQ9NSI2 230 aaPredicted RBP21.48■■□□□ 1.03
NEDD8-201ENST00000250495 HS3ST3A1Q9Y663 406 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 TRPM6Q9BX84 2022 aa21.48■■□□□ 1.03
NEDD8-201ENST00000250495 RNF103O00237 685 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 SDC3O75056 442 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 CHRNB2P17787 502 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 ITGB7P26010 798 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 L1CAMP32004 1257 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 STAT1P42224 750 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 MAPKAPK2P49137 400 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 KLK7P49862 253 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 JAM2P57087 298 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 GEMIN4P57678 1058 aaKnown RBP21.47■■□□□ 1.03
NEDD8-201ENST00000250495 ZNF211Q13398 564 aaPredicted RBP21.47■■□□□ 1.03
NEDD8-201ENST00000250495 C15orf59Q2T9L4 293 aaPredicted RBP21.47■■□□□ 1.03
NEDD8-201ENST00000250495 COL28A1Q2UY09 1125 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 RWDD4Q6NW29 188 aaKnown RBP21.47■■□□□ 1.03
NEDD8-201ENST00000250495 FBXL19Q6PCT2 694 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 CLEC17AQ6ZS10 378 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 STRADAQ7RTN6 431 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 DCP2Q8IU60 420 aaKnown RBP21.47■■□□□ 1.03
NEDD8-201ENST00000250495 PLPP6Q8IY26 295 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 SLC30A5Q8TAD4 765 aa21.47■■□□□ 1.03
NEDD8-201ENST00000250495 HNRNPLLQ8WVV9 542 aaKnown RBP21.47■■□□□ 1.03
NEDD8-201ENST00000250495 ISG20Q96AZ6 181 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms