RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 COPG1Q9Y678 874 aaKnown RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 SMIM31A0A1B0GVY4 71 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 NR2C2P49116 596 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 PSME3P61289 254 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 LAMC2Q13753 1193 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 TIFABQ6ZNK6 161 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 CYGBQ8WWM9 190 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 SLC29A1Q99808 456 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 SOX17Q9H6I2 414 aaPredicted RBP17.13■□□□□ 0.33
SGPP1-201ENST00000247225 PIM2Q9P1W9 311 aa17.13■□□□□ 0.33
SGPP1-201ENST00000247225 PLOD2O00469 737 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 PROZP22891 400 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 ATICP31939 592 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 PPARGP37231 505 aaPredicted RBP17.12■□□□□ 0.33
SGPP1-201ENST00000247225 MAGEA3P43357 314 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 LIMK2P53671 638 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 BST2Q10589 180 aaKnown RBP17.12■□□□□ 0.33
SGPP1-201ENST00000247225 TMEM110Q86TL2 294 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 LPGAT1Q92604 370 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 RTP4Q96DX8 246 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 KLRG1Q96E93 195 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 ASB7Q9H672 318 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 AP4S1Q9Y587 144 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 TTC24A2A3L6 582 aaPredicted RBP17.12■□□□□ 0.33
SGPP1-201ENST00000247225 AURKAO14965 403 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 MCF2P10911 925 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 CES1P23141 567 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 PTPN3P26045 913 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 GRIA3P42263 894 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 OAZ1P54368 228 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 ESRP1Q6NXG1 681 aaKnown RBP17.12■□□□□ 0.33
SGPP1-201ENST00000247225 ZBTB49Q6ZSB9 765 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
SGPP1-201ENST00000247225 FAM47BQ8NA70 645 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 POMKQ9H5K3 350 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 SPON1Q9HCB6 807 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 DSEQ9UL01 958 aa17.12■□□□□ 0.33
SGPP1-201ENST00000247225 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
SGPP1-201ENST00000247225 TMX2-CTNND1H3BSU7 103 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 SPTLC1O15269 473 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 CHRNA4P43681 627 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 PSMD7P51665 324 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 TKTL1P51854 596 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ZBTB17Q13105 803 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 FUT11Q495W5 492 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 OGFRL1Q5TC84 451 aaPredicted RBP17.11■□□□□ 0.33
SGPP1-201ENST00000247225 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 DNAAF2Q9NVR5 837 aaKnown RBP17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ACOT9Q9Y305 439 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 CSADQ9Y600 493 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 DLX3O60479 287 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 TRMUO75648 421 aaKnown RBP17.11■□□□□ 0.33
SGPP1-201ENST00000247225 TMCC1O94876 653 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 YWHAQP27348 245 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 SNX16P57768 344 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 OR6P1Q8NGX9 317 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 C6orf203Q9P0P8 240 aaPredicted RBP17.11■□□□□ 0.33
SGPP1-201ENST00000247225 COL4A5P29400 1685 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ARHGAP10A1A4S6 786 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 C7orf72A4D263 438 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 MATN2O00339 956 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 RECQL4O94761 1208 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 SLC5A2P31639 672 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ZNF423Q2M1K9 1284 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
SGPP1-201ENST00000247225 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ARHGAP36Q6ZRI8 547 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 BEST2Q8NFU1 509 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 ULBP1Q9BZM6 244 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 FAM96AQ9H5X1 160 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 RAP2CQ9Y3L5 183 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 PTGDR2Q9Y5Y4 395 aa17.11■□□□□ 0.33
SGPP1-201ENST00000247225 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 GRID2O43424 1007 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 HUS1O60921 280 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 DDHD2O94830 711 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 AHSGP02765 367 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 YAP1P46937 504 aaKnown RBP17.1■□□□□ 0.33
SGPP1-201ENST00000247225 BCAT1P54687 386 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 CAPRIN1Q14444 709 aaKnown RBP17.1■□□□□ 0.33
SGPP1-201ENST00000247225 ZNF470Q6ECI4 717 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 OFCC1Q8IZS5 231 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 TSPAN1O60635 241 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 SUPT7LO94864 414 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 C22orf31O95567 290 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 LGALS2P05162 132 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 SPANXN3Q5MJ09 141 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 NPWQ8N729 165 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 APPL2Q8NEU8 664 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 HAPLN3Q96S86 360 aa17.1■□□□□ 0.33
SGPP1-201ENST00000247225 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms