RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SUPT20HL2P0C7V6 817 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 VDRP11473 427 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FOXN2P32314 431 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PRKAA1Q13131 559 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 NAB1Q13506 487 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 GRTP1Q5TC63 336 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ZNF677Q86XU0 584 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FAM126BQ8IXS8 530 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 OSCP1Q8WVF1 389 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RHOBTB2Q9BYZ6 727 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ELOVL6Q9H5J4 265 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 COPG1Q9Y678 874 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 A2ML1A8K2U0 1454 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 NOBOXO60393 691 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 GEMP55040 296 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 HPCAP84074 193 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FMO1Q01740 532 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PDK4Q16654 411 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ZDHHC13Q8IUH4 622 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 SEPT1Q8WYJ6 367 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TBL1YQ9BQ87 522 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FAM192AQ9GZU8 254 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 A0A087WXM4 84 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 OGTO15294 1046 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PTSQ03393 145 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 IL18R1Q13478 541 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 COMMD2Q86X83 199 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 IFNLR1Q8IU57 520 aaPredicted RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 WDR18Q9BV38 432 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 STN1Q9H668 368 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 DYRK4Q9NR20 520 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 IKZF3Q9UKT9 509 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 HBS1LQ9Y450 684 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 GOT1P17174 413 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RRM2P31350 389 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 THPOP40225 353 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CEBPGP53567 150 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CADM1Q9BY67 442 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 RMND5AQ9H871 391 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 DDX43Q9NXZ2 648 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 KRT6AP02538 564 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 KRT6BP04259 564 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RPL14P50914 215 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 RPS27LQ71UM5 84 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 OSGEPL1Q9H4B0 414 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 DNAAF2Q9NVR5 837 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 KLHL3Q9UH77 587 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CCDC88CQ9P219 2028 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TSPAN4O14817 238 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 OR5B17Q8NGF7 314 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 METTL6Q8TCB7 284 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 S100A14Q9HCY8 104 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TSPAN9O75954 239 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 GLT6D1Q7Z4J2 308 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 C8orf59Q8N0T1 100 aaPredicted RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 JOSD2Q8TAC2 188 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RNF181Q9P0P0 153 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RABGEF1Q9UJ41 708 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PGAM1P18669 254 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ADSSP30520 456 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 STIP1P31948 543 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 CNTN2Q02246 1040 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ART5Q96L15 291 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CYP2S1Q96SQ9 504 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 NYAP2Q9P242 653 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 VWDEQ8N2E2 1590 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 SCAMP1O15126 338 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FMO3P31513 532 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 UNC5BQ8IZJ1 945 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FBXO32Q969P5 355 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 SLC47A1Q96FL8 570 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 FOPNLQ96NB1 174 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 UBE2OQ9C0C9 1292 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 SMARCAD1Q9H4L7 1026 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.61□□□□□ -1.19
RIF1-201ENST00000243326 C9P02748 559 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CCR1P32246 355 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TUBP50607 506 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PGGT1BP53609 377 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TSC22D1Q15714 1073 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CERCAMQ5T4B2 595 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 EFL1Q7Z2Z2 1120 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 SERAC1Q96JX3 654 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 SPATA16Q9BXB7 569 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 BCL2L14Q9BZR8 327 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RPRD1BQ9NQG5 326 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 TIMM22Q9Y584 194 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PCDHGC5Q9Y5F6 944 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 P4HA2O15460 535 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CLPXO76031 633 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CCNA2P20248 432 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ITGAXP20702 1163 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 RPS6KA3P51812 740 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 GAD2Q05329 585 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 C1QBPQ07021 282 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 PUDPQ08623 228 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ABRAXAS1Q6UWZ7 409 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 APLFQ8IW19 511 aaPredicted RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 H2AFYO75367 372 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms