RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ARL5CA6NH57 179 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 GABRDO14764 452 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 BUD23O43709 281 aaKnown RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 TOMM70O94826 608 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ITGB1P05556 798 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ETS2P15036 469 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 HDCP19113 662 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 SEMA3BQ13214 749 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 CCDC153Q494R4 210 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 PDZD4Q76G19 769 aaPredicted RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 RCN3Q96D15 328 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 TEKT5Q96M29 485 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 CDRT15Q96T59 188 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 EPAS1Q99814 870 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 CDY2AQ9Y6F7 541 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 SBF1O95248 1867 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 CCDC189A1A4V9 331 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 THP07101 528 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 HOXD8P13378 290 aaPredicted RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 MRPS22P82650 360 aaKnown RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 CBLBQ13191 982 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ZNF789Q5FWF6 425 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 USP50Q70EL3 339 aaPredicted RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 TMC7Q7Z402 723 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 BNIPLQ7Z465 357 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 TFAP2DQ7Z6R9 452 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ZC3HC1Q86WB0 502 aaKnown RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 GATA6Q92908 595 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ILKAPQ9H0C8 392 aaPredicted RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 PGK1P00558 417 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 SLC35E2BP0CK96 405 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 TBCCQ15814 346 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 SDCCAG8Q86SQ7 713 aaPredicted RBP17.1■□□□□ 0.33
SSPN-201ENST00000242729 ZNF354CQ86Y25 554 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 TMA16Q96EY4 203 aaKnown RBP17.1■□□□□ 0.33
SSPN-201ENST00000242729 C1orf21Q9H246 121 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 FAM105AQ9NUU6 356 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 PCDHGB4Q9UN71 923 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 PCDHGB5Q9Y5G0 923 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 TFEBP19484 476 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 PIK3R1P27986 724 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
SSPN-201ENST00000242729 ADAM17P78536 824 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 DQX1Q8TE96 717 aaKnown RBP17.1■□□□□ 0.33
SSPN-201ENST00000242729 ELMO2Q96JJ3 720 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 NPAS2Q99743 824 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 GTSE1Q9NYZ3 720 aa17.1■□□□□ 0.33
SSPN-201ENST00000242729 MYOCOSA0A1B0GUC4 107 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 ITKQ08881 620 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 INSCQ1MX18 579 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 XKR4Q5GH76 650 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 ZNF470Q6ECI4 717 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 LIMS2Q7Z4I7 341 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 CLEC14AQ86T13 490 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
SSPN-201ENST00000242729 FBXW8Q8N3Y1 598 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 OR6Y1Q8NGX8 325 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
SSPN-201ENST00000242729 ARHGAP26Q9UNA1 814 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 THOP1P52888 689 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 GALNT2Q10471 571 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 CDH17Q12864 832 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
SSPN-201ENST00000242729 SEL1L3Q68CR1 1132 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 ZNF467Q7Z7K2 595 aaPredicted RBP17.09■□□□□ 0.33
SSPN-201ENST00000242729 TMEM151AQ8N4L1 468 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 RTP3Q9BQQ7 232 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 IL22Q9GZX6 179 aa17.09■□□□□ 0.33
SSPN-201ENST00000242729 AGO3Q9H9G7 860 aaKnown RBP17.09■□□□□ 0.33
SSPN-201ENST00000242729 MAGEA13PA6NCF6 341 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 DLX3O60479 287 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 GJB3O75712 270 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.33
SSPN-201ENST00000242729 XRCC1P18887 633 aaPredicted RBP17.08■□□□□ 0.33
SSPN-201ENST00000242729 GRIK3Q13003 919 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 CSHL1Q14406 222 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.33
SSPN-201ENST00000242729 ATPAF2Q8N5M1 289 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 HDAC11Q96DB2 347 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 PHF21BQ96EK2 531 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 SLC39A8Q9C0K1 460 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 CNGB3Q9NQW8 809 aa17.08■□□□□ 0.33
SSPN-201ENST00000242729 GRID2O43424 1007 aa17.08■□□□□ 0.32
SSPN-201ENST00000242729 SLC1A2P43004 574 aa17.08■□□□□ 0.32
SSPN-201ENST00000242729 ANO4Q32M45 955 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms