RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 DCLK1O15075 740 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 DNTTP04053 509 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC6A11P48066 632 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 SERINC3Q13530 473 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 MLF2Q15773 248 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ARMC12Q5T9G4 340 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 UBALD2Q8IYN6 164 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZNF599Q96NL3 588 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 PLA2G2FQ9BZM2 168 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 VPS51Q9UID3 782 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 TCF3P15923 654 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ARL4CP56559 192 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 DNAJC21Q5F1R6 531 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 OR6K2Q8NGY2 324 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 HDAC11Q96DB2 347 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 TPX2Q9ULW0 747 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 PFDN6O15212 129 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 TMCC1O94876 653 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 CD72P21854 359 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 FCHO2Q0JRZ9 810 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 SKIDA1Q1XH10 827 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 ERAP2Q6P179 960 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRELID2Q8N945 189 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 PCDH9Q9HC56 1237 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 R3HDM2Q9Y2K5 976 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 MFHAS1Q9Y4C4 1052 aa11.32□□□□□ -0.6
TNFAIP3-201ENST00000237289 TCRBV7S2A1N4TA0A589 114 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 J3KR12 359 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 HOXC11O43248 304 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 CACNG3O60359 315 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 POP4O95707 220 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRNPP04156 253 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ITGAVP06756 1048 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 CTHP32929 405 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 CAV1Q03135 178 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 GALNT2Q10471 571 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 APCDD1Q8J025 514 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRICKLE1Q96MT3 831 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 TRIM51Q9BSJ1 452 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 GPR63Q9BZJ6 419 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 LRRC19Q9H756 370 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 EVLQ9UI08 416 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ERVW-1Q9UQF0 538 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ATP9BO43861 1147 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 HOXB2P14652 356 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 CD86P42081 329 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 PPIDQ08752 370 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 PARP6Q2NL67 630 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 CENPUQ71F23 418 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 TTC1Q99614 292 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAM83CQ9BQN1 747 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 BCLAF3A2AJT9 711 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 GOLGA6L10A6NI86 522 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAM170BA6NMN3 283 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 PCDH8O95206 1070 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAM193AP78312 1265 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 TJAP1Q5JTD0 557 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 PCDH20Q8N6Y1 951 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 LPCAT1Q8NF37 534 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 GDAP1Q8TB36 358 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 UHRF1Q96T88 793 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 LMAN1LQ9HAT1 526 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 ANLNQ9NQW6 1124 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 TBC1D30Q9Y2I9 924 aa11.31□□□□□ -0.6
TNFAIP3-201ENST00000237289 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 WASH4PA8MWX3 477 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 NPC1O15118 1278 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRAMEF11O60813 436 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 NFKB1P19838 968 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 LAMB3Q13751 1172 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 CARD16Q5EG05 197 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 FYB2Q5VWT5 728 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 TSTD1Q8NFU3 115 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 SORCS1Q8WY21 1168 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 ASB2Q96Q27 587 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 LRRC1Q9BTT6 524 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 FICDQ9BVA6 458 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 RAD51CO43502 376 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 KLF8O95600 359 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 SRPRAP08240 638 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 ALADP13716 330 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 HLA-FP30511 346 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms