RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 LHX5Q9H2C1 402 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 TRIM45Q9H8W5 580 aaPredicted RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 BPIFA1Q9NP55 256 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 UBA2Q9UBT2 640 aaPredicted RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 TULP2O00295 520 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 PQBP1O60828 265 aaKnown RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 TNFAIP8O95379 198 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ETS2P15036 469 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 GPC1P35052 558 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 DDR2Q16832 855 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 SPPL2AQ8TCT8 520 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ST3GAL5Q9UNP4 418 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 TRPV2Q9Y5S1 764 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ADGRA3Q8IWK6 1321 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 C1orf232A0A0U1RR37 186 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 KRT6AP02538 564 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 KRT6BP04259 564 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 URODP06132 367 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 MYL4P12829 197 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 PSMB9P28065 219 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 KRT6CP48668 564 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 PTPRNQ16849 979 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 ZIK1Q3SY52 487 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 SCARA3Q6AZY7 606 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 ARCQ7LC44 396 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 TNIP2Q8NFZ5 429 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 MYLPFQ96A32 169 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 MTFMTQ96DP5 389 aaKnown RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 FCRL2Q96LA5 508 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 CHRAC1Q9NRG0 131 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 PLLPQ9Y342 182 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 SMIM28A0A1B0GU29 152 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 LTA4HP09960 611 aaKnown RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 PSME3P61289 254 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 SLC44A4Q53GD3 710 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 TRMT10BQ6PF06 316 aaKnown RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 TMEM86AQ8N2M4 240 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 PGBD3Q8N328 593 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 DHRSXQ8N5I4 330 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 UTP15Q8TED0 518 aaKnown RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 KLRG2A4D1S0 409 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 RGSL1A5PLK6 1076 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 MSI1O43347 362 aaKnown RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 PCNAP12004 261 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 ALOX15P16050 662 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 HIST2H2ACQ16777 129 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 HIST2H2AA3Q6FI13 130 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 GPSM1Q86YR5 675 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 FBXW8Q8N3Y1 598 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 MAGEE2Q8TD90 523 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 DENND2DQ9H6A0 471 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 EGFL7Q9UHF1 273 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 FFAR3O14843 346 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 GPR42O15529 346 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 ZNF7P17097 686 aaPredicted RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 FOXN2P32314 431 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 RABGGTBP53611 331 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 SLC16A1P53985 500 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 WNT3AP56704 352 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 SLC20A2Q08357 652 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 ZNF284Q2VY69 593 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 FAM98BQ52LJ0 330 aaKnown RBP17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 TMCO5AQ8N6Q1 288 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 FBXO30Q8TB52 745 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 ZNF516Q92618 1163 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 BDH2Q9BUT1 245 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 KLQ9UEF7 1012 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 SEPT3Q9UH03 358 aa17.35■□□□□ 0.37
SLC1A4-201ENST00000234256 MFSD11O43934 449 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 STAU1O95793 577 aaKnown RBP17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 KRT8P05787 483 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 CD52P31358 61 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 RAP1GDS1P52306 607 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 HSPA14Q0VDF9 509 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 SREBF2Q12772 1141 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 KCTD21Q4G0X4 260 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ZFP1Q6P2D0 407 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 SLC4A11Q8NBS3 891 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 OR56A4Q8NGH8 313 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ACMSDQ8TDX5 336 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 SEPT8Q92599 483 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 RMND5AQ9H871 391 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ZNF112Q9UJU3 913 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 XRN1Q8IZH2 1706 aaKnown RBP17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ARIH2O95376 493 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 SERPINA6P08185 405 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 SERPINB1P30740 379 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ARL2P36404 184 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 GRM5P41594 1212 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ADRM1Q16186 407 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 OTOP3Q7RTS5 596 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 PIWIL4Q7Z3Z4 852 aaKnown RBP17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 FAM35AQ86V20 835 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 CDYL2Q8N8U2 506 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 MED8Q96G25 268 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ZDHHC18Q9NUE0 388 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 PAIP2BQ9ULR5 123 aaKnown RBP17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 ANKRD6Q9Y2G4 727 aa17.34■□□□□ 0.37
SLC1A4-201ENST00000234256 LTN1O94822 1766 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms