RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 HLA-DQA2P01906 255 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 LTA4HP09960 611 aaKnown RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 NFKB1P19838 968 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 EML3Q32P44 896 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ADHFE1Q8IWW8 467 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 TMCO1Q9UM00 188 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 CHKBQ9Y259 395 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PPP1R16AQ96I34 528 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 S100A13Q99584 98 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ZFYVE1Q9HBF4 777 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 NUDT5Q9UKK9 219 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 BANF1O75531 89 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 NOS2P35228 1153 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 IL12RB1P42701 662 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 POLD2P49005 469 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 EIF2B2P49770 351 aaKnown RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ELF3P78545 371 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 FBXO30Q8TB52 745 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PYDC1Q8WXC3 89 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 SKA1Q96BD8 255 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 AGXT2Q9BYV1 514 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 VPS45Q9NRW7 570 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 MARCH2Q9P0N8 246 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 RECQL4O94761 1208 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 CD86P42081 329 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 C21orf59P57076 290 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 OR52K1Q8NGK4 314 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 TEKT5Q96M29 485 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SNX6Q9UNH7 406 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 STON1Q9Y6Q2 735 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 HOXC6P09630 235 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 MRPS22P82650 360 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 PPIDQ08752 370 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 INO80DQ53TQ3 878 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 KCNK18Q7Z418 384 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 C8orf59Q8N0T1 100 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF655Q8N720 491 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF671Q8TAW3 534 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SELENOMQ8WWX9 145 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 WNT8BQ93098 351 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SENP8Q96LD8 212 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 DGCR6LQ9BY27 220 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 BLOC1S4Q9NUP1 217 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SLC9A8Q9Y2E8 581 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 UQCRBP14927 111 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 PTPN1P18031 435 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 CDC25CP30307 473 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 TRIM32Q13049 653 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 TOMM20Q15388 145 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 INSCQ1MX18 579 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 PCDH20Q8N6Y1 951 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 CXorf40AQ8TE69 158 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ELMO1Q92556 727 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 DLG3Q92796 817 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 P2RX7Q99572 595 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ANXA5P08758 320 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 FGRP09769 529 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ADCYAP1R1P41586 468 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 BIKQ13323 160 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 C15orf59Q2T9L4 293 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 STAG3L4Q8TBR4 150 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 STK32AQ8WU08 396 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 OR12D3Q9UGF7 316 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 COG5Q9UP83 839 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 LYVE1Q9Y5Y7 322 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF24P17028 368 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 CRADDP78560 199 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 MEA1Q16626 185 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 STXBP5Q5T5C0 1151 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 DDI2Q5TDH0 399 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 NEPROQ6NW34 567 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 KIAA0408Q6ZU52 694 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SUSD6Q92537 303 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 CNGB3Q9NQW8 809 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 PXDNQ92626 1479 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 A0A087WXM4 84 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 A0A0A0MRY4 1105 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SGTAO43765 313 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 ABCG1P45844 678 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 CNTN2Q02246 1040 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 NRF1Q16656 503 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 FAM183BPQ6ZVS7 135 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 GLIS3Q8NEA6 775 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 PGM2Q96G03 612 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 SPATA13Q96N96 652 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 RSPH9Q9H1X1 276 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 TRIT1Q9H3H1 467 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
LAMA4-201ENST00000230538 C15orf41Q9Y2V0 281 aa11.69□□□□□ -0.54
LAMA4-201ENST00000230538 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 A0A0B4J269 797 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms