RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 INPPL1O15357 1258 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 FBXO21O94952 628 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 PGAM1P18669 254 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 MX2P20592 715 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 GLDCP23378 1020 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 CCDC14Q49A88 953 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 HSP90AA5PQ58FG0 334 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 SETD3Q86TU7 594 aaPredicted RBP20.92■□□□□ 0.94
SNX3-201ENST00000230085 ZNF280BQ86YH2 543 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 ZDHHC17Q8IUH5 632 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 URGCPQ8TCY9 931 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 DLG3Q92796 817 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 TWNKQ96RR1 684 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 SERPINI1Q99574 410 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 PLEKHA5Q9HAU0 1116 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 CHD9Q3L8U1 2897 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 ARHGEF15O94989 841 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 TFAP2AP05549 437 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 CA3P07451 260 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 DESP17661 470 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 PTPN9P43378 593 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 ALDH1A3P47895 512 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 RPL10AP62906 217 aaKnown RBP20.91■□□□□ 0.94
SNX3-201ENST00000230085 HERC3Q15034 1050 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 LRIT3Q3SXY7 679 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 ARMC3Q5W041 872 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 FBXL19Q6PCT2 694 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 B3GNT6Q6ZMB0 384 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 FRMD7Q6ZUT3 714 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 CMTR2Q8IYT2 770 aaKnown RBP20.91■□□□□ 0.94
SNX3-201ENST00000230085 DEFB107AQ8IZN7 70 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 DDI1Q8WTU0 396 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 PPP1R14BQ96C90 147 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 TIMMDC1Q9NPL8 285 aa20.91■□□□□ 0.94
SNX3-201ENST00000230085 VILLO15195 856 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 DNAJA2O60884 412 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 LYPLA1O75608 230 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 DDHD2O94830 711 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 THP07101 528 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 RALBP11234 206 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 KLF10Q13118 480 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 APOFQ13790 326 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 FAM183BPQ6ZVS7 135 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 MPP5Q8N3R9 675 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 C1orf127Q8N9H9 656 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 SP7Q8TDD2 431 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 C11orf84Q9BUA3 381 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 SNRNP25Q9BV90 132 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 NXF1Q9UBU9 619 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 BARX2Q9UMQ3 279 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 MRPL42Q9Y6G3 142 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 TPP1O14773 563 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 B4GALT3O60512 393 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 TNFAIP8O95379 198 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 ITGA2BP08514 1039 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 CPA3P15088 417 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 KCNE1P15382 129 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 PRKAA2P54646 552 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 EPHB1P54762 984 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 RFTN1Q14699 578 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 RARS2Q5T160 578 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 SH3PXD2AQ5TCZ1 1133 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 JADE1Q6IE81 842 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 OLFML1Q6UWY5 402 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 C16orf89Q6UX73 402 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 LRRC43Q8N309 656 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 TMEM130Q8N3G9 435 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 CPSF7Q8N684 471 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 SHKBP1Q8TBC3 707 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 CENPIQ92674 756 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 PPP1R10Q96QC0 940 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 SLC4A5Q9BY07 1137 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 MRPL9Q9BYD2 267 aaKnown RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 CDH19Q9H159 772 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 ASB7Q9H672 318 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 CWH43Q9H720 699 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 SMYD3Q9H7B4 428 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 MTMR10Q9NXD2 777 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 RCOR3Q9P2K3 495 aaPredicted RBP20.9■□□□□ 0.94
SNX3-201ENST00000230085 DMTF1Q9Y222 760 aa20.9■□□□□ 0.94
SNX3-201ENST00000230085 A0A0A0MRY4 1105 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 NFICP08651 508 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 THRAP10827 490 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 ARRB2P32121 409 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 SNX16P57768 344 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 SMAD3P84022 425 aaKnown RBP20.89■□□□□ 0.93
SNX3-201ENST00000230085 ADGRE1Q14246 886 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 TLR1Q15399 786 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 PKDCCQ504Y2 493 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 GRTP1Q5TC63 336 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 SPRED2Q7Z698 418 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 TMEM110Q86TL2 294 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 SATL1Q86VE3 508 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 C10orf107Q8IVU9 208 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 FIBCD1Q8N539 461 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 POU5F2Q8N7G0 328 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 KIF12Q96FN5 646 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 DCUN1D1Q96GG9 259 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 SPATA13Q96N96 652 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 CPNE1Q99829 537 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms