RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 ILF2Q12905 390 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 TTC7BQ86TV6 843 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 APOPT1Q96IL0 206 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 KCNQ5Q9NR82 932 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ADH1AP07327 375 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 IZUMO2Q6UXV1 221 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 NIPA1Q7RTP0 329 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 TINF2Q9BSI4 451 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 SUCOQ9UBS9 1254 aaKnown RBP13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 TPP1O14773 563 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 RIPK2O43353 540 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 CYP2R1Q6VVX0 501 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 HNMTP50135 292 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ZCCHC23Q6ZST2 131 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 TCP10LQ8TDR4 215 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 MARK4Q96L34 752 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 MYLK2Q9H1R3 596 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-201ENST00000225964 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
COL1A1-201ENST00000225964 CTPS1P17812 591 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 RBL1P28749 1068 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 MYBPC1Q00872 1141 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 CCNIQ14094 377 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 EML3Q32P44 896 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 FAM183BPQ6ZVS7 135 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 CHPFQ8IZ52 775 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ZMYM2Q9UBW7 1377 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 LDLRP01130 860 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 FTH1P02794 183 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 IL6P05231 212 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 SSTR1P30872 391 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ADGRG2Q8IZP9 1017 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 UBE2E3Q969T4 207 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 ATAD3AQ9NVI7 634 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 SLC12A4Q9UP95 1085 aa13.4□□□□□ -0.26
COL1A1-201ENST00000225964 DNTTP04053 509 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 RBBP4Q09028 425 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 STXBP5Q5T5C0 1151 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 LYPLAL1Q5VWZ2 237 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ZPBP2Q6X784 338 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 STK32CQ86UX6 486 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PROSER1Q86XN7 944 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 CLEC4MQ9H2X3 399 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 NOS2P35228 1153 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 IRF8Q02556 426 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 RACGAP1Q9H0H5 632 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ETNK2Q9NVF9 386 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 THAP1Q9NVV9 213 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PHGDHO43175 533 aaKnown RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PDE5AO76074 875 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 SCTRP47872 440 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 NEDD8Q15843 81 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 GPR156Q8NFN8 814 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 GPR152Q8TDT2 470 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF304Q9HCX3 659 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 DNPEPQ9ULA0 475 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 H0Y858 1186 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 CD3EAPO15446 510 aaKnown RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 GALNT3Q14435 633 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 FAM187BQ17R55 369 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 C15orf59Q2T9L4 293 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 CNSTQ6PJW8 725 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 AFTPHQ6ULP2 937 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 GDPD5Q8WTR4 605 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 NMD3Q96D46 503 aaKnown RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 ASB2Q96Q27 587 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 SEMA6AQ9H2E6 1030 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 REEP1Q9H902 201 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 TNS2Q63HR2 1409 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PRG2P13727 222 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 NPR3P17342 541 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PARP6Q2NL67 630 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 XKR6Q5GH73 641 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 CYB5D1Q6P9G0 228 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 EIF3MQ7L2H7 374 aaKnown RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 RIOX2Q8IUF8 465 aa13.39□□□□□ -0.27
COL1A1-201ENST00000225964 PSTKQ8IV42 348 aaKnown RBP13.39□□□□□ -0.27
COL1A1-201ENST00000225964 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms