RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 PKDCCQ504Y2 493 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 CXCL17Q6UXB2 119 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 NT5DC4Q86YG4 428 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 SNRNP27Q8WVK2 155 aaKnown RBP16.19■□□□□ 0.18
SF3A2-201ENST00000221494 CDRT15Q96T59 188 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 NT5C1AQ9BXI3 368 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 LRRC40Q9H9A6 602 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 CDHR5Q9HBB8 845 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 GPATCH2LQ9NWQ4 482 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 OXSMQ9NWU1 459 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 TUBA8Q9NY65 449 aaPredicted RBP16.19■□□□□ 0.18
SF3A2-201ENST00000221494 IGSF9Q9P2J2 1179 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 HMGXB4Q9UGU5 601 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 SUN2Q9UH99 717 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 TSPAN16Q9UKR8 245 aa16.19■□□□□ 0.18
SF3A2-201ENST00000221494 C17orf102A2RUQ5 167 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 TRIM38O00635 465 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 ACOT8O14734 319 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 AIM2O14862 343 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 PFKMP08237 780 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 MGAT1P26572 445 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 RPL14P50914 215 aaKnown RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 SLC10A2Q12908 348 aaPredicted RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 FOXD4Q12950 439 aaPredicted RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 CA9Q16790 459 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 C7orf31Q8N865 590 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 DNAJB3Q8WWF6 145 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 ARPC5LQ9BPX5 153 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 SHCBP1LQ9BZQ2 653 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 WDR41Q9HAD4 459 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 NSMCE4AQ9NXX6 385 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 DTLQ9NZJ0 730 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 TSPAN1O60635 241 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 CABYRO75952 493 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 H6PDO95479 791 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 MCF2P10911 925 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 XRCC1P18887 633 aaPredicted RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 GRIA1P42261 906 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 NUP107P57740 925 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 PPIDQ08752 370 aaKnown RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 TRAP1Q12931 704 aaKnown RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 LPIN1Q14693 890 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 NCBP2-AS2Q69YL0 99 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 ZYG11AQ6WRX3 759 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 ZNF554Q86TJ5 538 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 COLGALT1Q8NBJ5 622 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 KLHDC9Q8NEP7 349 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 BHLHE22Q8NFJ8 381 aaPredicted RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 TSPAN14Q8NG11 270 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 UBA3Q8TBC4 463 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 ASB9Q96DX5 294 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 CPB2Q96IY4 423 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 CSPG4P5Q96PW8 444 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 OR52B2Q96RD2 323 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 UHRF1Q96T88 793 aaPredicted RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 NUF2Q9BZD4 464 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 MRM3Q9HC36 420 aaKnown RBP16.18■□□□□ 0.18
SF3A2-201ENST00000221494 ZBTB26Q9HCK0 441 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 VPS45Q9NRW7 570 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 PSAT1Q9Y617 370 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 EVPLQ92817 2033 aa16.18■□□□□ 0.18
SF3A2-201ENST00000221494 BMP10O95393 424 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 GNRH1P01148 92 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ITGB3P05106 788 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ZNF26P17031 533 aaPredicted RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ACADVLP49748 655 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 USP4Q13107 963 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ART3Q13508 389 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 CEACAM7Q14002 265 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 RAB6CQ53S08 254 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PPP6R3Q5H9R7 873 aaPredicted RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 LIPMQ5VYY2 423 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 TTC30AQ86WT1 665 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 LILRA2Q8N149 483 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 FNDC8Q8TC99 324 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 MAPK15Q8TD08 544 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PXYLP1Q8TE99 480 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PKP2Q99959 881 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 RAB6CQ9H0N0 254 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 COPS7BQ9H9Q2 264 aaPredicted RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 NMRAL1Q9HBL8 299 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PNPLA3Q9NST1 481 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 IPO11Q9UI26 975 aaKnown RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PTBP2Q9UKA9 531 aaKnown RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 AP4E1Q9UPM8 1137 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 CDYLQ9Y232 598 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 GINS2Q9Y248 185 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 RAD54BQ9Y620 910 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 USP3Q9Y6I4 520 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 MAGEB16A2A368 324 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 DYTNA2CJ06 578 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 TRIM64CA6NLI5 447 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ERI2A8K979 691 aaKnown RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PIK3R2O00459 728 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ZMPSTE24O75844 475 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 NFICP08651 508 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms