RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 HSF2Q03933 536 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ACSBG2Q5FVE4 666 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 BICRALQ6AI39 1079 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CDC73Q6P1J9 531 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 VN1R5Q7Z5H4 357 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 SPOCK2Q92563 424 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ZNF518BQ9C0D4 1074 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CMTM6Q9NX76 183 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 BARX2Q9UMQ3 279 aaPredicted RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 AAR2Q9Y312 384 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 SYNCRIPO60506 623 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 VDRP11473 427 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ECT2LQ008S8 904 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 POU5F1Q01860 360 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 CNTN1Q12860 1018 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 DPYSL3Q14195 570 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PHKG1Q16816 387 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 MFSD5Q6N075 450 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 BHLHB9Q6PI77 547 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 KCNMB4Q86W47 210 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 GMCL1P1Q8NEA9 526 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PIK3C3Q8NEB9 887 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 DNAJB14Q8TBM8 379 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 SYT15Q9BQS2 421 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 HGH1Q9BTY7 390 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 INVSQ9Y283 1065 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A9O60656 530 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PEX11AO75192 247 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CELF2O95319 508 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 PABPC1P11940 636 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A6P19224 532 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A1P22309 533 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A4P22310 534 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A3P35503 534 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A5P35504 534 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CENPAP49450 140 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 TROAPQ12815 778 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 BNIP2Q12982 314 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 TMEM132BQ14DG7 1078 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 HIST2H2ACQ16777 129 aaPredicted RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 HIST2H2AA3Q6FI13 130 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 MPZL3Q6UWV2 235 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PGBD3Q8N328 593 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 MINDY2Q8NBR6 621 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 B3GALNT2Q8NCR0 500 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ZDHHC15Q96MV8 337 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A7Q9HAW7 530 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A10Q9HAW8 530 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 UGT1A8Q9HAW9 530 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 IKZF3Q9UKT9 509 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 MAPRE3Q9UPY8 281 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 A0A0B4J269 797 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 FAM240BA0A1B0GVZ2 78 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 C5orf60A6NFR6 353 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 BTNL10A8MVZ5 291 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 LINGO3P0C6S8 592 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 SUPT20HL2P0C7V6 817 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PCNAP12004 261 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 SREBF1P36956 1147 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ALDH7A1P49419 539 aaKnown RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 SULT1C3Q6IMI6 304 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PRR23BQ6ZRT6 265 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 KRT77Q7Z794 578 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CCDC36Q8IYA8 594 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ACOX2Q99424 681 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CBWD1Q9BRT8 395 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 COPS4Q9BT78 406 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 GANQ9H2C0 597 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 LRRC19Q9H756 370 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 CCNB1IP1Q9NPC3 277 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 GNPTGQ9UJJ9 305 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 A0A0G2JPF8 293 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 HNRNPCL3B7ZW38 293 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 H7C0S8 307 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 EPHB6O15197 1021 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 BIRC5O15392 142 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PRKD3O94806 890 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 HNRNPCL4P0DMR1 293 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 MZF1P28698 734 aaPredicted RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 BCAP31P51572 246 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 NTRK3Q16288 839 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 SPANXN3Q5MJ09 141 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 PLEKHH3Q7Z736 793 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ZNF671Q8TAW3 534 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 FAM172AQ8WUF8 416 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 GMCL1Q96IK5 515 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 TMEM138Q9NPI0 162 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 ADPRHL2Q9NX46 363 aa10.57□□□□□ -0.72
VCL-201ENST00000211998 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
VCL-201ENST00000211998 TOR1BO14657 336 aa10.56□□□□□ -0.72
VCL-201ENST00000211998 VPS4BO75351 444 aa10.56□□□□□ -0.72
VCL-201ENST00000211998 CST1P01037 141 aa10.56□□□□□ -0.72
VCL-201ENST00000211998 PAEPP09466 180 aa10.56□□□□□ -0.72
VCL-201ENST00000211998 EPHA3P29320 983 aa10.56□□□□□ -0.72
VCL-201ENST00000211998 CRABP2P29373 138 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms