RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Slc25a11Q9CR62 314 aaKnown RBP15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Lypla1P97823 230 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Znf821Q6PD05 413 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr867Q7TRF3 331 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ccdc32Q8BS39 179 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Atg14Q8CDJ3 492 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rmnd5bQ91YQ7 393 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Borcs5Q9D920 195 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Myh15E9Q264 1925 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ubr2Q6WKZ8 1755 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ptpn3A2ALK8 913 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 ShdO88834 343 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Shmt1P50431 478 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rbm44Q3V089 1013 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Trcg1Q58Y74 825 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pde1aQ61481 565 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Bmp3Q8BHE5 468 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Slc30a5Q8R4H9 761 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcdha2Q91Y17 948 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mfsd5Q921Y4 450 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gemin2Q9CQQ4 269 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Atp5dQ9D3D9 168 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Serpinb9bQ9DAV6 377 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Dmap1Q9JI44 468 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rasgrp2Q9QUG9 608 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mbl1P39039 239 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 NcstnP57716 708 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Morf4l1P60762 362 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 1700061G19RikQ08EE8 705 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Galnt10Q6P9S7 603 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Zbtb33Q8BN78 671 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Coq6Q8R1S0 476 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Guca1bQ8VBV8 201 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Prox1P48437 737 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Psen1P49769 467 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Smpdl3bP58242 456 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gata5P97489 404 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Osbpl6Q8BXR9 959 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Nxnl1Q8VC33 217 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mrpl9Q99N94 265 aaKnown RBP15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Duoxa2Q9D311 320 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Zscan5bB2RTN3 468 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pdcd1Q02242 288 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Tmem63bQ3TWI9 832 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fbxw8Q8BIA4 598 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 CherpQ8CGZ0 936 aaKnown RBP15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mark4Q8CIP4 752 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pacs1Q8K212 961 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Acad10Q8K370 1069 aa15.75■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Trim12cD3Z3L3 497 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm45837F7D3W5 961 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm6408J3QNG1 320 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ctnnd2O35927 1247 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Stmn3O70166 180 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cct7P80313 544 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cdk7Q03147 346 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Sppl2bQ3TD49 578 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr20Q7TRX9 314 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Hspa13Q8BM72 471 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Nipal4Q8BZF2 406 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Sorcs3Q8VI51 1219 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Vps11Q91W86 941 aaKnown RBP15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pbld2Q9CXN7 288 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pramef20B1ARV6 477 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Vmn2r67K7N6T2 851 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Lrrn4P59383 733 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Adcy6Q01341 1165 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcsk7Q61139 770 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Tnfaip2Q61333 691 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Bcap31Q61335 245 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Slc41a1Q8BJA2 512 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Spon2Q8BMS2 330 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Swi5Q8K3D3 89 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Plbd1Q8VCI0 550 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 DeraQ91YP3 318 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fundc1Q9DB70 155 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Has3O08650 554 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 ChkaO54804 453 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 BpgmP15327 259 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gad2P48320 585 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Orai3Q6P8G8 290 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mon1aQ6PDG8 556 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Q8BGA7 448 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 4921501E09RikA0A0R4J054 908 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Top6blJ3QMY9 579 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pknox1O70477 436 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 PdgfrbP05622 1098 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cxcl9P18340 126 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rab21P35282 222 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Zbtb14Q08376 449 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Q3UK37 420 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Tas2r131Q7M708 310 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Q8CC96 669 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Spag16Q8K450 639 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ripk3Q9QZL0 486 aa15.74■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm21293E9Q4G9 266 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 HalP35492 657 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ccdc85bQ6PDY0 202 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ldhal6bQ8BVP2 382 aa15.73■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 AA792892Q8C6S1 278 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms