RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Krt8P11679 490 aaKnown RBP23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 RhoP15409 348 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Gja1P23242 382 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Bmp8aP34821 399 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Htr2cP34968 459 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 SiaeP70665 541 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Vps45P97390 570 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Prickle1Q3U5C7 832 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Lsmem1Q3UQS2 128 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Foxr1Q3UTB7 268 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Trim24Q64127 1051 aaKnown RBP23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ric8bQ80XE1 520 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 4933402J07RikQ8BHX0 270 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Msantd1Q8BIL2 278 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Usp43Q8BUM9 1132 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ldlrap1Q8C142 308 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Gspt1Q8R050 636 aaKnown RBP23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Tspan33Q8R3S2 283 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Zfp566Q8VCI1 386 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Rin1Q921Q7 763 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Stard13Q923Q2 1113 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 SardhQ99LB7 919 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Alg14Q9D081 217 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 MceeQ9D1I5 178 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Polr3cQ9D483 533 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Tsga13Q9DA17 273 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mtmr7Q9Z2C9 660 aa23.08■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Gm9573F7C950 1606 aa23.08■■□□□ 1.28
Scn1b-201ENSMUST00000098548 PtprdQ64487 1912 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Sh2d4bA6X942 431 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Sept7O55131 436 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Klc1O88447 541 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 DgkaO88673 730 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 ShdO88834 343 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 PfklP12382 780 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Rfc1P35601 1131 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tead2P48301 445 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 SftpbP50405 377 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ripk2P58801 539 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cd244Q07763 397 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tmem120bQ3TA38 339 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Pyroxd1Q3TMV7 498 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Alkbh5Q3TSG4 395 aaKnown RBP23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Zfp791Q497V9 528 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Fbxo39Q5NBU5 443 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cand1Q6ZQ38 1230 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Olfr1128Q7TR47 311 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Olfr698Q7TRN4 311 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ccdc68Q8BVC4 333 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Acsl5Q8JZR0 683 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Abhd8Q8R0P8 439 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Smarcd2Q99JR8 531 aaKnown RBP23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Polr3hQ9D2C6 204 aaKnown RBP23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Bscl2Q9Z2E9 383 aa23.07■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Skint8A7XV07 398 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Usp51B1AY15 661 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Zfp758E9QAA1 583 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gm42641I6L9G2 585 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Vmn2r88L7N1W8 857 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cd2P08920 344 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 CremP27699 357 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 PdgfbP31240 241 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Mmp13P33435 472 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Il12bP43432 335 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gad2P48320 585 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 E2f2P56931 443 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Lig3P97386 1015 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 VegfcP97953 415 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 InhbaQ04998 424 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Krt26Q3TRJ4 462 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Zfp217Q3U0X6 1041 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cxcl17Q5UW37 119 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cabs1Q8C633 391 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Olfr703Q9EPF5 319 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Stk11Q9WTK7 436 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gm5538W4VSP6 401 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Vps4bP46467 444 aaKnown RBP23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Lhx3P50481 400 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Acot8P58137 320 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Serpina6Q06770 397 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Mif4gdQ3UBZ5 222 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 E330034G19RikQ3UWX6 351 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gcnt3Q5JCT0 437 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Hif1aQ61221 836 aaKnown RBP23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Hmgxb4Q80Y32 594 aaKnown RBP23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cdkn3Q810P3 211 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ofcc1Q8BGX4 166 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Fbxo9Q8BK06 437 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Rfx6Q8C7R7 927 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Zc2hc1cQ8CCG1 527 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 HpdlQ8K248 371 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Slc36a1Q8K4D3 475 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Abcf2Q99LE6 628 aaKnown RBP23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Atoh8Q99NA2 322 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Fam173bQ9D1Z3 247 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ubqln5Q9D4I8 510 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Necab3Q9D6J4 353 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Krt7Q9DCV7 457 aa23.06■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tnrc18Q80WC3 2878 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tnfrsf14A0A1W2P7D5 276 aa23.05■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms