RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Myl6Q60605 151 aaKnown RBP12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Scaf8Q6DID3 1268 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Podnl1Q6P3Y9 559 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc39a14Q75N73 489 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Taf5Q8C092 801 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vmn1r206Q8R277 312 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Plbd1Q8VCI0 550 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pcdhb10Q91VE5 797 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ptchd4B9EKX1 904 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ccdc7bE9Q9Y3 381 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 AmacrO09174 381 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Akap3O88987 864 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 IapP03975 557 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kctd21Q3URF8 260 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mtmr12Q80TA6 747 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tyw3Q8BSA9 257 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Castor2Q8CAB8 329 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc39a3Q99K24 317 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 PtpruB1AUH1 1446 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pold1P52431 1105 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 LipeP54310 759 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Adcy4Q91WF3 1077 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Eps8l2Q99K30 729 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mrpl9Q99N94 265 aaKnown RBP12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tbx3P70324 741 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 PostnQ62009 838 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Itga2Q62469 1178 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 CerkQ8K4Q7 531 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kbtbd2G3X9X1 623 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kpna3O35344 521 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 DgkaO88673 730 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Adra1dP97714 562 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pyroxd1Q3TMV7 498 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Nr1d2Q60674 576 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 DnerQ8JZM4 737 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Adgre4Q91ZE5 689 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc26a5Q99NH7 744 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Etnk1Q9D4V0 363 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 MsraQ9D6Y7 233 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Xkr9Q5GH62 373 aa12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cyp2c29Q64458 490 aa12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 UnkQ8BL48 810 aaKnown RBP12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tsen34Q8BMZ5 316 aa12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 Btbd9Q8C726 612 aa12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 St7lQ8K4P7 559 aa12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rab27aQ9ERI2 221 aa12.08□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rpl9-ps6A0A140T8T4 192 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 2610021A01RikE9Q0Q3 834 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rpl9P51410 192 aaKnown RBP12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Siglec10Q80ZE3 688 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ddx52Q8K301 598 aaKnown RBP12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pramel1Q99MW3 458 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Chd1P40201 1711 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm3893E9Q1I1 302 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Traf6P70196 530 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 RelaQ04207 549 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyp2d12Q8BVD2 504 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dnali1Q8BVN8 258 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tcirg1Q9JHF5 834 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vmn2r55G3UWZ4 781 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vmn2r53L7N473 806 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mybpc3O70468 1270 aaKnown RBP12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ccr1P51675 355 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Aqp8P56404 261 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm4951Q3UED7 406 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Orm1Q60590 207 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dlgap2Q8BJ42 1059 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Itm2bO89051 266 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 RxraP28700 467 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Serpina3gQ5I2A0 440 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Zfyve1Q810J8 777 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tubgcp5Q8BKN5 1024 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Bdh2Q8JZV9 245 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ubqln1Q8R317 582 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vps4aQ8VEJ9 437 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr697Q8VFM4 317 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gprc5bQ923Z0 410 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ngly1Q9JI78 651 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm8180E9PXN0 145 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hes2O54792 157 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rc3h2P0C090 1187 aaKnown RBP12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Abi3bpQ59IW6 1179 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 OmpQ64288 163 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rxfp1Q6R6I7 758 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dusp4Q8BFV3 398 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 SynpoQ8CC35 929 aaKnown RBP12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ppwd1Q8CEC6 646 aaKnown RBP12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cdhr5Q8VHF2 831 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Sorcs3Q8VI51 1219 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pcdhb3Q91XZ7 784 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 TfQ921I1 697 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Spata9Q9D9R3 252 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Arid3bQ9Z1N7 568 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Usp32F8VPZ3 1604 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gpsm3Q3U1Z5 159 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ints6lQ8BND4 861 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mark4Q8CIP4 752 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 BroxQ8K2Q7 411 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rsph1Q8VIG3 301 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Haus5Q9D786 619 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 504 ms