RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Fcrl5Q68SN8 596 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cpne3Q8BT60 533 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Bri3bpQ8BXV2 253 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ctxn3Q8BXZ0 80 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Olfr385Q8VGT1 312 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 SncaipQ99ME3 962 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam212aQ9CX62 282 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gbp11A9YVJ5 442 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vmn2r70K7N702 854 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 CremP27699 357 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Smpdl3bP58242 456 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 ProcrQ64695 242 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Usp7Q6A4J8 1103 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rad9bQ6WBX7 403 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pgs1Q8BHF7 553 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Wdr59Q8C0M0 992 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Atp5dQ9D3D9 168 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Clec4aQ9QZ15 238 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gria4Q9Z2W8 902 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Adamtsl3G3UXC7 1706 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lgr4A2ARI4 951 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vmn2r59E9PUT5 865 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gsg1l2M0QWL6 290 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dhx15O35286 795 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dpep1P31428 410 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Adra1dP97714 562 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 IdsQ08890 552 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Klrb1Q0ZUP1 214 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gsdmc2Q2KHK6 480 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vps51Q3UVL4 782 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rnf145Q5SWK7 663 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rgl2Q61193 778 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ddx55Q6ZPL9 600 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dhx33Q80VY9 698 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc41a1Q8BJA2 512 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mtrf1Q8K126 446 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rnf8Q8VC56 488 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc14a1Q8VHL0 384 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rnf181Q9CY62 165 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tlr6Q9EPW9 795 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mrpl46Q9EQI8 283 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lima1Q9ERG0 753 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Smpd3Q9JJY3 655 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Katna1Q9WV86 491 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Smarcb1Q9Z0H3 385 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ptgdr2Q9Z2J6 382 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 BcorQ8CGN4 1759 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Impa1O55023 277 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 GcP21614 476 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sipa1P46062 1037 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Prox1P48437 737 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Atp6v1e1P50518 226 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vps45P97390 570 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ssxb3Q6XAS4 170 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ftsj1Q8CBC7 324 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Il17cQ8K4C5 194 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sh3kbp1Q8R550 709 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 AenQ9CZI9 336 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hspa12bQ9CZJ2 685 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 RhojQ9ER71 214 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 AgxtO35423 414 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cct7P80313 544 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Olfm4Q3UZZ4 505 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc20a1Q61609 681 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ggnbp1Q6K1E7 370 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mvb12bQ6KAU4 317 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mapre3Q6PER3 281 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Msantd1Q8BIL2 278 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sfrp1Q8C4U3 314 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Akr1c20Q8VC77 323 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pth2rQ91V95 546 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rmnd5bQ91YQ7 393 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tnfaip8Q921Z5 198 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ears2Q9CXJ1 523 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slamf8Q9D3G2 278 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Syvn1Q9DBY1 612 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 TfebQ9R210 475 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 F6Y6L6 278 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 C1dO35473 141 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Igf2bp1O88477 577 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 BrafP28028 804 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ccnd3P30282 292 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Atp6v0d1P51863 351 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cd36Q08857 472 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 EfsQ64355 560 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 SyncripQ7TMK9 623 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 R3hcc1lQ8BJM3 775 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lin7aQ8JZS0 233 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Bclaf1Q8K019 919 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lrrc42Q8R2U7 421 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ndfip2Q91ZP6 311 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gemin2Q9CQQ4 269 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vps35Q9EQH3 796 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ptpn3A2ALK8 913 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Defa8P50706 81 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Serpinb5P70124 375 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mtf2Q02395 593 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Aarsd1Q3THG9 412 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 9930111J21Rik1Q5SVP0 844 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Traf3Q60803 567 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms