RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Fbxo10Q7TQF2 950 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr169Q7TS53 313 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Golm1Q91XA2 393 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ints11Q9CWS4 600 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gria3Q9Z2W9 888 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Sbno2Q7TNB8 1349 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm3147A0A0J9YU88 481 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm10424A0A0J9YVD0 481 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fam71dD3YV92 440 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Usp17ldG5E8G2 545 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Usp17lcG5E8I7 545 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm7971J3QMM8 481 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Hsd17b2P51658 381 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Abl2Q4JIM5 1182 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tmcc2Q80W04 706 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ppm1lQ8BHN0 360 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Washc1Q8VDD8 475 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pard3bQ9CSB4 1203 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Efhd2Q9D8Y0 240 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PolhQ9JJN0 694 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rad18Q9QXK2 509 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm16440K7N6G6 218 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm8271L7N2E2 218 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 CidecP56198 239 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fitm2P59266 262 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q32M26 199 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gdpd5Q640M6 607 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Brsk2Q69Z98 735 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pik3c3Q6PF93 887 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 SgtaQ8BJU0 315 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rsl1d1Q8BVY0 452 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Osbpl2Q8BX94 484 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cnot6Q8K3P5 557 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr1494Q8VGP8 315 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PacrglQ9D3X5 248 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Scube2Q9JJS0 997 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Acot1O55137 419 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rab10P61027 200 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q8BGK9 164 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kcnv1Q8BZN2 503 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Izumo2Q9DA16 220 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Syde1Q9DBZ9 737 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 RhouQ9EQT3 261 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Parp14Q2EMV9 1817 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Crb1Q8VHS2 1405 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kir3dl1P83555 432 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ccdc177Q3UHB8 706 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gpr65Q61038 337 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Msantd2Q6NZR2 559 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Celf6Q7TN33 460 aaKnown RBP10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 GcshQ91WK5 170 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Trmt11Q9CWH5 460 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Il22bQ9JJY8 179 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr1145A2AVC7 325 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 GalcP54818 684 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 CtskP55097 329 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 AasdhpptQ9CQF6 309 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 VapbQ9QY76 243 aaKnown RBP10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Galk1Q9R0N0 392 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Keap1Q9Z2X8 624 aaKnown RBP10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r7E9PYL5 915 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ccdc85cE9Q6B2 420 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r3H3BJ88 915 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r6H3BK29 913 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Guca1aP43081 202 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zmat1Q3V0C1 714 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pcdh20Q8BIZ0 952 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Trpv3Q8K424 791 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 DgkgQ91WG7 788 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ptbp2Q91Z31 531 aaKnown RBP10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 DhddsQ99KU1 333 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 AnkhQ9JHZ2 492 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cib1Q9Z0F4 191 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm5751A2AHC8 147 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 FanceB8JJD6 213 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r1O70410 912 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc2a2P14246 523 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mmp20P57748 482 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Trim40Q3UWA4 246 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr8Q60892 310 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc25a23Q6GQS1 467 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Atg4cQ811C2 458 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Orai2Q8BH10 250 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pex5lQ8C437 567 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tex13bQ99MW5 186 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc24a3Q99PD7 645 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ssr3Q9DCF9 185 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Itih4A6X935 942 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Alox12P39655 663 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dsc2P55292 902 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Stxbp5lQ5DQR4 1185 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Atp2c1Q80XR2 918 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mettl21cQ8BLU2 248 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cpsf4Q8BQZ5 211 aaKnown RBP10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 MaelQ8BVN9 434 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Adgra1Q8C4G9 578 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Prmt5Q8CIG8 637 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 IntS13Q8QZV7 732 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Atxn7Q8R4I1 867 aa10.26□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr695Q8VFM3 315 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms