RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Pcyt1aP49586 367 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 YwhaqP68254 245 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 ErfP70459 551 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Itga4Q00651 1039 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 AcadsQ07417 412 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 IdsQ08890 552 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Oas1fQ14AZ4 364 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sema4aQ62178 760 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sp140Q6NSQ5 534 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mtrf1lQ8BJU9 373 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Atg14Q8CDJ3 492 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cadm1Q8R5M8 456 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Vwa7Q9JHA8 891 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ap4b1Q9WV76 738 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Scn3aA2ASI5 1947 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3636E9Q5P1 227 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 TpteG5E8H5 664 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Adcy1O88444 1118 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ctbp1O88712 441 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Eps8Q08509 821 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Znf865Q3U3I9 1058 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nxpe4Q52KP5 543 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Papss1Q60967 624 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fnip2Q80TD3 1108 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zbtb41Q811F1 908 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dupd1Q8BK84 215 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zfp398Q8BV16 643 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tbc1d17Q8BYH7 645 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tlk1Q8C0V0 766 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ccdc90bQ8C3X2 256 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Map3k21Q8VDG6 1002 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr866Q8VFI7 312 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Arhgef3Q91X46 524 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 4930513O06RikQ9D549 161 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mbd1Q9Z2E2 636 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm10406A6NAS4 205 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3373A6NAS7 205 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3252E9PUT9 216 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3002E9PW72 216 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3298E9PW80 205 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3468E9QAJ8 216 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3667K7N757 205 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3739L7N296 216 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 DldO08749 509 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Psmd7P26516 321 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Stx1bP61264 288 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Lhx5P61375 402 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pld5Q3UNN8 536 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3558Q5FWC9 205 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 CcnhQ61458 323 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Atp11bQ6DFW5 1175 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr1505Q7TQQ2 316 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Q8BGA7 448 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Enpp4Q8BTJ4 456 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nup85Q8R480 656 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mrps2Q924T2 291 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 PigxQ99LV7 254 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ndufaf1Q9CWX2 328 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Q9D1F3 157 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tmbim4Q9DA39 238 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Copg2Q9QXK3 871 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rbck1Q9WUB0 508 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Bscl2Q9Z2E9 383 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm44511A0A0N4SW10 223 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pcna-ps2A0A140T8V5 261 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Olfr292F8VQ84 308 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Stam2O88811 523 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 AladP10518 330 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 PcnaP17918 261 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Crabp2P22935 138 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 MipP51180 263 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tekt4Q149S1 447 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Axdnd1Q3UZ57 424 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nr1h2Q60644 446 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Krt73Q6NXH9 539 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Trnau1apQ80VC6 287 aaKnown RBP11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gabra5Q8BHJ7 463 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Snx8Q8CFD4 459 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ppa2Q91VM9 330 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Serpina3nQ91WP6 418 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Psmd12Q9D8W5 456 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Mrpl40Q9Z2Q5 206 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Prrg1A2BFE8 218 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Armt1A6H630 439 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pnldc1B2RXZ1 531 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Prdm15E9Q8T2 1174 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 FaahO08914 579 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 ClppO88696 272 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Sept4P28661 478 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gdf6P43028 454 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Klf1P46099 358 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Plk2P53351 682 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nlrc4Q3UP24 1024 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Stxbp5lQ5DQR4 1185 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Kcna4Q61423 654 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 GnasQ6R0H7 1133 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Zfp418Q8BFS8 652 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Fbxw21Q8BI38 468 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Arhgap28Q8BN58 729 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Dedd2Q8QZV0 330 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms