RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 KRT10P13645 584 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 TCF3P15923 654 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 SLC6A4P31645 630 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 HOXD12P35452 270 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 GALK1P51570 392 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 ZNF135P52742 658 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 NRG1Q02297 640 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 MMRN1Q13201 1228 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 DPYSQ14117 519 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 PDGFRLQ15198 375 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 TAZQ16635 292 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 ANKRD20A8PQ5CZ79 823 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 TFDP3Q5H9I0 405 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 SPDYCQ5MJ68 293 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 ACBD5Q5T8D3 534 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 CCDC181Q5TID7 509 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 MANEALQ5VSG8 457 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 KAZNQ674X7 775 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 ANO7Q6IWH7 933 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 RWDD4Q6NW29 188 aaKnown RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 HTR3DQ70Z44 454 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 C14orf80Q86SX3 495 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 PIP4P1Q86T03 277 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 VSIG1Q86XK7 387 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 RFX6Q8HWS3 928 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 BBS7Q8IWZ6 715 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 RASGEF1CQ8N431 466 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 CPA6Q8N4T0 437 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 FAF2Q96CS3 445 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 C1orf74Q96LT6 269 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 PRICKLE1Q96MT3 831 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 RPRD1AQ96P16 312 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 BBC3Q96PG8 261 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 PRMT1Q99873 361 aaKnown RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 DDX50Q9BQ39 737 aaKnown RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 HERPUD2Q9BSE4 406 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 HEMGNQ9BXL5 484 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 MAK16Q9BXY0 300 aaKnown RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 TPSD1Q9BZJ3 242 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 EBF3Q9H4W6 596 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 ARHGEF4Q9NR80 690 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 CWC15Q9P013 229 aaKnown RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 OR12D3Q9UGF7 316 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 CDC23Q9UJX2 597 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 STOML2Q9UJZ1 356 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 VANGL2Q9ULK5 521 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 NEU3Q9UQ49 428 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 APOBEC2Q9Y235 224 aaKnown RBP9.65□□□□□ -0.86
PHGDH-228ENST00000641847 ZNF510Q9Y2H8 683 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 MRFAP1Q9Y605 127 aa9.65□□□□□ -0.86
PHGDH-228ENST00000641847 APOL1O14791 398 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 FGF10O15520 208 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-228ENST00000641847 DAPK3O43293 454 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 FGGP02679 453 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 IL4RP24394 825 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 EPHB2P29323 1055 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 HTR7P34969 479 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 DYNLT1P63172 113 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 CKAP4Q07065 602 aaKnown RBP9.64□□□□□ -0.87
PHGDH-228ENST00000641847 NR1H3Q13133 447 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 TFDP2Q14188 446 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 TRIP6Q15654 476 aaKnown RBP9.64□□□□□ -0.87
PHGDH-228ENST00000641847 WHAMMP3Q1A5X7 153 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 DUOXA1Q1HG43 343 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 LONRF2Q1L5Z9 754 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 ADGRF1Q5T601 910 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 LYSMD4Q5XG99 296 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 FBXL22Q6P050 247 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 RFWD3Q6PCD5 774 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 SLC23A3Q6PIS1 610 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 LRRC31Q6UY01 552 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 ZNF605Q86T29 641 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-228ENST00000641847 SLC13A5Q86YT5 568 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-228ENST00000641847 FAM217AQ8IXS0 508 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 ZNF683Q8IZ20 524 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 LGI2Q8N0V4 545 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 CPXM2Q8N436 756 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 PQLC3Q8N755 202 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 ACTRT1Q8TDG2 376 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 MYEOVQ96EZ4 313 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 RNF157Q96PX1 679 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 FAM83CQ9BQN1 747 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 POLR3BQ9NW08 1133 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-228ENST00000641847 CACNA2D2Q9NY47 1150 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 RAXQ9Y2V3 346 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 WNT6Q9Y6F9 365 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 PCNX2A6NKB5 2137 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 APC2O95996 2303 aa9.64□□□□□ -0.87
PHGDH-228ENST00000641847 ASCC3Q8N3C0 2202 aaKnown RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 MYO18BQ8IUG5 2567 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 IGLV3-10A0A075B6K4 115 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TCRBV7S2A1N4TA0A589 114 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TYW5A2RUC4 315 aaKnown RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 DRGXA6NNA5 263 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 PDE2AO00408 941 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TSPAN3O60637 253 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 CST8O60676 142 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms