RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TRPV5Q9NQA5 729 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 DDX43Q9NXZ2 648 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 KCNK4Q9NYG8 393 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ITGB1BP2Q9UKP3 347 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 BUD23O43709 281 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 MT-ND1P03886 318 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 CXCL8P10145 99 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 COPZ1P61923 177 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 DGKDQ16760 1214 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 FAM214AQ32MH5 1076 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 MPZL3Q6UWV2 235 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 BNC2Q6ZN30 1099 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 TLK2Q86UE8 772 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 KIAA0319LQ8IZA0 1049 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 APOPT1Q96IL0 206 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 NOL11Q9H8H0 719 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 COQ10BQ9H8M1 238 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 GIT1Q9Y2X7 761 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 NCANO14594 1321 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 KPNA4O00629 521 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 OGTO15294 1046 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 XRCC1P18887 633 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ADSLP30566 484 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 NME5P56597 212 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 CDO1Q16878 200 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 SMU1Q2TAY7 513 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 FNBP1LQ5T0N5 605 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 PEX5LQ8IYB4 626 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ZCCHC7Q8N3Z6 543 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 CCNYL1Q8N7R7 359 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ALKBH8Q96BT7 664 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 NAA50Q9GZZ1 169 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 WDR55Q9H6Y2 383 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 DNAJC28Q9NX36 388 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ZC3H7BQ9UGR2 993 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 PSMD13Q9UNM6 376 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 SATB2Q9UPW6 733 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 GPSM3Q9Y4H4 160 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 MYADML2A6NDP7 307 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PFDN6O15212 129 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 CST8O60676 142 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PABPC1P11940 636 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PTPN1P18031 435 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ANXA13P27216 316 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PHKA2P46019 1235 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 GCNT1Q02742 428 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ENPEPQ07075 957 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ZIK1Q3SY52 487 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 UBE2UQ5VVX9 321 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ZNF398Q8TD17 642 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 DMRTB1Q96MA1 342 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 C2orf40Q9H1Z8 148 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 NRDE2Q9H7Z3 1164 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ZFYVE28Q9HCC9 887 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 GPAMQ9HCL2 828 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 SLC24A2Q9UI40 661 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 TYROBPO43914 113 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 TSPAN9O75954 239 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ARF4P18085 180 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 SLC1A1P43005 524 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 CLK3P49761 638 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 IST1P53990 364 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 KIZQ2M2Z5 673 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 TMEM270Q6UE05 265 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 ACTRT2Q8TDY3 377 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PIF1Q9H611 641 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 GTF3C4Q9UKN8 822 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 A8MV72 311 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 STIP1P31948 543 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 MSS51Q4VC12 460 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 OTUD3Q5T2D3 398 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 TRAF7Q6Q0C0 670 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 VASH1Q7L8A9 365 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 SLC15A4Q8N697 577 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 PSMA8Q8TAA3 256 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 LRTOMTQ8WZ04 291 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 NFKBIZQ9BYH8 718 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 KCNK13Q9HB14 408 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 AP4S1Q9Y587 144 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
RBFOX1-224ENST00000641259 MAGEB2O15479 319 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 TIPRLO75663 272 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 F2P00734 622 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 SNRPAP09012 282 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 SMIM10L2AP0DMW4 78 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 SMIM10L2BP0DMW5 78 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 MYL6P60660 151 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 CENPCQ03188 943 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 TMEM132AQ24JP5 1023 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 WDR44Q5JSH3 913 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 RNF111Q6ZNA4 994 aa12.05□□□□□ -0.48
RBFOX1-224ENST00000641259 CATSPER1Q8NEC5 780 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms