RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 SLC2A11Q9BYW1 496 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 DPH5Q9H2P9 285 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PCDH9Q9HC56 1237 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 EPB41L5Q9HCM4 733 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 DNAJC17Q9NVM6 304 aaKnown RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 RBM22Q9NW64 420 aaKnown RBP eCLIP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 GTSE1Q9NYZ3 720 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PAK5Q9P286 719 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 KLHL8Q9P2G9 620 aaPredicted RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 DMGDHQ9UI17 866 aaKnown RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 GGA2Q9UJY4 613 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 NEU2Q9Y3R4 380 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 A0A0A0MRY4 1105 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TARSL2A2RTX5 802 aaKnown RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ZSCAN5CA6NGD5 496 aaPredicted RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TRIM24O15164 1050 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ZBTB24O43167 697 aaPredicted RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 CACNG3O60359 315 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 OPHN1O60890 802 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TULP3O75386 442 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 PEX11BO96011 259 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ASGR2P07307 311 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 HLA-FP30511 346 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 SLC6A11P48066 632 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 DGKGP49619 791 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 RENBPP51606 427 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 PLK1P53350 603 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 IFI35P80217 286 aaPredicted RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ITKQ08881 620 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 SLC10A7Q0GE19 358 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ZBTB17Q13105 803 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 HNRNPDQ14103 355 aaKnown RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 DMC1Q14565 340 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ELF2Q15723 593 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 P3H1Q32P28 736 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 PLEKHG6Q3KR16 790 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TEX44Q53QW1 395 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 PITRM1Q5JRX3 1037 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TMEM31Q5JXX7 168 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ANKRD20A2Q5SQ80 823 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ANKRD20A1Q5TYW2 823 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 MARC1Q5VT66 337 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ANKRD20A3Q5VUR7 823 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 DUPD1Q68J44 220 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 GRAMD4Q6IC98 578 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 RETSATQ6NUM9 610 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 LINGO4Q6UY18 593 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 C4orf22Q6V702 233 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 C12orf40Q86WS4 652 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 IFT20Q8IY31 132 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 AHI1Q8N157 1196 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ZNF567Q8N184 647 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 SLC44A3Q8N4M1 653 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 DCAF4L2Q8NA75 395 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 IFT81Q8WYA0 676 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 MAML1Q92585 1016 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 FATE1Q969F0 183 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 NXPE3Q969Y0 559 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 LRRC45Q96CN5 670 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 LMLNQ96KR4 655 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 SPATA13Q96N96 652 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ZNF599Q96NL3 588 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 AGAP3Q96P47 875 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 VAT1Q99536 393 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ANKZF1Q9H8Y5 726 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 KCNK12Q9HB15 430 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 PDFQ9HBH1 243 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 IGSF9Q9P2J2 1179 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 DEC1Q9P2X7 70 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 UBA2Q9UBT2 640 aaPredicted RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 VPS51Q9UID3 782 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TRHDEQ9UKU6 1024 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 INTS6Q9UL03 887 aaKnown RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 SNX24Q9Y343 169 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 TTLL3Q9Y4R7 772 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 OR51B4Q9Y5P0 310 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 ACTL7AQ9Y615 435 aa8.94□□□□□ -0.98
HLA-B-258ENST00000640615 NUP210Q8TEM1 1887 aaPredicted RBP8.94□□□□□ -0.98
HLA-B-258ENST00000640615 HELZP42694 1942 aaKnown RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 ESYT3A0FGR9 886 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 F5H423 210 aaPredicted RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 ARNTLO00327 626 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 CTIFO43310 598 aaKnown RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 ZMPSTE24O75844 475 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 CISD3P0C7P0 127 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 POLR2EP19388 210 aaKnown RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 GJA4P35212 333 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 MMP13P45452 471 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 RPL21P46778 160 aaKnown RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 ARF5P84085 180 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 KDSRQ06136 332 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 ZNF235Q14590 738 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 RFTN1Q14699 578 aaPredicted RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 LBRQ14739 615 aaKnown RBP8.93□□□□□ -0.98
HLA-B-258ENST00000640615 TRADDQ15628 312 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 PARP6Q2NL67 630 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 GAB4Q2WGN9 574 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 FUT11Q495W5 492 aa8.93□□□□□ -0.98
HLA-B-258ENST00000640615 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms