RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CD86P42081 329 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 CCR3P51677 355 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 CHRNB3Q05901 458 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 CDK18Q07002 472 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 ZNF662Q6ZS27 426 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 GPSM1Q86YR5 675 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 PRDM12Q9H4Q4 367 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 ARL15Q9NXU5 204 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 ZNF112Q9UJU3 913 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 LOC100653049A0A140TA62 436 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 UBDO15205 165 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 KRT34O76011 436 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 GUCA1CO95843 209 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 STXBP5Q5T5C0 1151 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 GLMNQ92990 594 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 SNX27Q96L92 541 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 MRPL45Q9BRJ2 306 aaKnown RBP11.19□□□□□ -0.62
SCN1B-208ENST00000640135 CEP41Q9BYV8 373 aa11.19□□□□□ -0.62
SCN1B-208ENST00000640135 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
SCN1B-208ENST00000640135 PNMA8BQ9ULN7 279 aaPredicted RBP11.19□□□□□ -0.62
SCN1B-208ENST00000640135 ANKDD1BA6NHY2 528 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 MEI4A8MW99 385 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 SGTAO43765 313 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 PRNPP04156 253 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ITGAVP06756 1048 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 SLC2A4P14672 509 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 RAD23BP54727 409 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 TLE2Q04725 743 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 MIIPQ5JXC2 388 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 PRMT9Q6P2P2 845 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 METTL6Q8TCB7 284 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 DTX3LQ8TDB6 740 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 EPS8L3Q8TE67 593 aaKnown RBP11.18□□□□□ -0.62
SCN1B-208ENST00000640135 HNRNPABQ99729 332 aaKnown RBP11.18□□□□□ -0.62
SCN1B-208ENST00000640135 TMBIM4Q9HC24 238 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 GTF2IRD1Q9UHL9 959 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 BTN3A1O00481 513 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 SOCS7O14512 581 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 RGS14O43566 566 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ADRA1BP35368 520 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 NFYCQ13952 458 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ZNF544Q6NX49 715 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 VPS33AQ96AX1 596 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 FZD8Q9H461 694 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 RNF19AQ9NV58 838 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCN1B-208ENST00000640135 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 C22orf31O95567 290 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 RHOQP17081 205 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 SERPINB10P48595 397 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 HSPA13P48723 471 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 C21orf59P57076 290 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 CDK20Q8IZL9 346 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 C10orf53Q8N6V4 93 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 GLIS3Q8NEA6 775 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 PPP1R13LQ8WUF5 828 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ELMO1Q92556 727 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 PHPT1Q9NRX4 125 aaPredicted RBP11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.18□□□□□ -0.62
SCN1B-208ENST00000640135 NDOR1Q9UHB4 597 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ERVW-1Q9UQF0 538 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 C15orf38-AP3S2A0A0A6YYH1 394 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 CCT8L1PA6NM43 557 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 RPL3P39023 403 aaKnown RBP11.18□□□□□ -0.62
SCN1B-208ENST00000640135 GPR15P49685 360 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ACSM2AQ08AH3 577 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ACSM2BQ68CK6 577 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ARPINQ7Z6K5 226 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 RPAINQ86UA6 219 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 LONP2Q86WA8 852 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 APOPT1Q96IL0 206 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 TMEM175Q9BSA9 504 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 TM6SF2Q9BZW4 377 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 PHACTR1Q9C0D0 580 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
SCN1B-208ENST00000640135 ARL5CA6NH57 179 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 TULP2O00295 520 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 RIPK2O43353 540 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 WARSP23381 471 aaKnown RBP11.17□□□□□ -0.62
SCN1B-208ENST00000640135 FMO4P31512 558 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 TRPC1P48995 793 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 NUDT2P50583 147 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 GRB14Q14449 540 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 N4BP2L1Q5TBK1 243 aaPredicted RBP11.17□□□□□ -0.62
SCN1B-208ENST00000640135 SLC26A9Q7LBE3 791 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 ATAD1Q8NBU5 361 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 MBOAT7Q96N66 472 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 NAALADL1Q9UQQ1 740 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 ENTPD4Q9Y227 616 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 C4BPAP04003 597 aaKnown RBP11.17□□□□□ -0.62
SCN1B-208ENST00000640135 MMP8P22894 467 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 ADAMTSL2Q86TH1 951 aa11.17□□□□□ -0.62
SCN1B-208ENST00000640135 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms