RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 NRIP1P48552 1158 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SULT1E1P49888 294 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SATB1Q01826 763 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SLC25A11Q02978 314 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PLAURQ03405 335 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 NNTQ13423 1086 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ZNF267Q14586 743 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TAF12Q16514 161 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PPM1LQ5SGD2 360 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SNX30Q5VWJ9 437 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 MSANTD2Q6P1R3 559 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 MAMDC2Q7Z304 686 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 RHOT1Q8IXI2 618 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 UBL4BQ8N7F7 174 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CLRN3Q8NCR9 226 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PDZD8Q8NEN9 1154 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 DQX1Q8TE96 717 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 RNF139Q8WU17 664 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ITFG2Q969R8 447 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CENPTQ96BT3 561 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PGAP3Q96FM1 320 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ZNF512Q96ME7 567 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 OSBPL9Q96SU4 736 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 NCAPGQ9BPX3 1015 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 MYLK2Q9H1R3 596 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SMOC1Q9H4F8 434 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ZNF334Q9HCZ1 680 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PDP2Q9P2J9 529 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 USP18Q9UMW8 372 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SAR1BQ9Y6B6 198 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 BRWD1Q9NSI6 2320 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 OBSL1O75147 1896 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 DENND4CQ5VZ89 1909 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ZNF840PA6NDX5 716 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 M0R3H8 397 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 KCNK3O14649 394 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SRGAP2O75044 1071 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TADA3O75528 432 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 RFPL2O75678 378 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CRTAMO95727 393 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TRUB2O95900 331 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 IGLV3-25P01717 112 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 HNRNPCP07910 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 RALAP11233 206 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 RARGP13631 454 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TCP1P17987 556 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 RDXP35241 583 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ATXN1P54253 815 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 KCNC3Q14003 757 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 HADHQ16836 314 aaKnown RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 DCAF12L1Q5VU92 463 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TXNRD3NBQ6F5E7 133 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ABHD17CQ6PCB6 329 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CYP4V2Q6ZWL3 525 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 POLNQ7Z5Q5 900 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TMEM150AQ86TG1 271 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TAC4Q86UU9 113 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TMC8Q8IU68 726 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 FAM156AQ8NDB6 213 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 FLCNQ8NFG4 579 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 CASP10Q92851 521 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 VMP1Q96GC9 406 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PEBP4Q96S96 227 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 NELL2Q99435 816 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 KLHL25Q9H0H3 589 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SMOC2Q9H3U7 446 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PIGVQ9NUD9 493 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 DDIT4Q9NX09 232 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 TRPM5Q9NZQ8 1165 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 UXTQ9UBK9 157 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 PCSK1NQ9UHG2 260 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 DPP7Q9UHL4 492 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 NUDT5Q9UKK9 219 aa8.22□□□□□ -1.09
SCARB2-220ENST00000640076 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCARB2-220ENST00000640076 ZNF185O15231 689 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 CCL16O15467 120 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 IRAK2O43187 625 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 PRPSAP2O60256 369 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 TBX18O95935 607 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 F9P00740 461 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 F11P03951 625 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.09
SCARB2-220ENST00000640076 KRT7P08729 469 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 HNRNPA1P09651 372 aaKnown RBP eCLIP8.21□□□□□ -1.09
SCARB2-220ENST00000640076 MSX1P28360 303 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 GJC1P36383 396 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 PPP3CCP48454 512 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 CD151P48509 253 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 RWDD2BP57060 319 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 DEUP1Q05D60 604 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 NME3Q13232 169 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 EIF4EBP2Q13542 120 aaPredicted RBP8.21□□□□□ -1.09
SCARB2-220ENST00000640076 SCYL2Q6P3W7 929 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 ELMSAN1Q6PJG2 1045 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 GPR155Q7Z3F1 870 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 FAM131BQ86XD5 332 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 KATNAL2Q8IYT4 538 aa8.21□□□□□ -1.09
SCARB2-220ENST00000640076 ELMOD1Q8N336 334 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms