RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 RHOP08100 348 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TYMPP19971 482 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ICAM3P32942 547 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GPD2P43304 727 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 AVPR1BP47901 424 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ALDH9A1P49189 494 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 INHBCP55103 352 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 STX4Q12846 297 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TEAD2Q15562 447 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PACS1Q6VY07 963 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 FAM35AQ86V20 835 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 DEPDC4Q8N2C3 294 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 C12orf76Q8N812 135 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MGARPQ8TDB4 240 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 JSRP1Q96MG2 331 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 C7orf25Q9BPX7 421 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PDE7BQ9NP56 450 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 AGPAT5Q9NUQ2 364 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 H2AFY2Q9P0M6 372 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PADI4Q9UM07 663 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 MTMR6Q9Y217 621 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 UBIAD1Q9Y5Z9 338 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 FAM208AQ9UK61 1670 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 EDDM13A0A1B0GTR0 161 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GNG14A0A1W2PPG7 69 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SYCE1LA8MT33 242 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 EVPLLA8MZ36 301 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 NDUFAB1O14561 156 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 JCHAINP01591 159 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 COPZ1P61923 177 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CAV1Q03135 178 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 DMC1Q14565 340 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 GRIK5Q16478 980 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TCEAL5Q5H9L2 206 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CST9Q5W186 159 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TRIM59Q8IWR1 403 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ANKRD42Q8N9B4 389 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 RFWD2Q8NHY2 731 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ATL1Q8WXF7 558 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PLD4Q96BZ4 506 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ZHX1-C8orf76Q96EF9 292 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PLEKHA8Q96JA3 519 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 INPP4AQ96PE3 977 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 HEPHQ9BQS7 1158 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 WDR6Q9NNW5 1121 aaKnown RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 HCN2Q9UL51 889 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ANKRD6Q9Y2G4 727 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 AHCTF1Q8WYP5 2266 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 FRMPD4Q14CM0 1322 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SOWAHBA6NEL2 793 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ATP5HO75947 161 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 FDFT1P37268 417 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 NUP107P57740 925 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 CYP4F8P98187 520 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 E2F1Q01094 437 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ORC1Q13415 861 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ZNF792Q3KQV3 632 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TCP11X2Q5H9J9 407 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 SH3BP5LQ7L8J4 393 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 NAT6Q93015 286 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 PRR11Q96HE9 360 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ZNF333Q96JL9 665 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 EBF3Q9H4W6 596 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 TMEM9BQ9NQ34 198 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 ITGB1BP2Q9UKP3 347 aa5.1□□□□□ -1.59
SCN1A-218ENST00000640036 A8MU76 341 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 GTPBP1O00178 669 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 TRDMT1O14717 391 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 YKT6O15498 198 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 SKAP2O75563 359 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 IGHEP01854 428 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 CYP3A5P20815 502 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 ME2P23368 584 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 PRCPP42785 496 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 NOVA1P51513 510 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 BIKQ13323 160 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 HNRNPDQ14103 355 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 ATP13A5Q4VNC0 1218 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 SDHAF4Q5VUM1 108 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 PEX5LQ8IYB4 626 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 Q8N9G6 341 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 SLC30A5Q8TAD4 765 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 FAM172AQ8WUF8 416 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 USP7Q93009 1102 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 TUBGCP3Q96CW5 907 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 NAF1Q96HR8 494 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 CABS1Q96KC9 395 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 BTN2A3PQ96KV6 586 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 RNF19AQ9NV58 838 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 KIF17Q9P2E2 1029 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 DUSP10Q9Y6W6 482 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 ASCC3Q8N3C0 2202 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 TRBV23OR9-2A0A075B6M9 112 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 HIST1H2ABP04908 130 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 NDUFS1P28331 727 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 FLT3P36888 993 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 RAP1GAPP47736 663 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 USP10Q14694 798 aaKnown RBP5.09□□□□□ -1.59
SCN1A-218ENST00000640036 SGCBQ16585 318 aa5.09□□□□□ -1.59
SCN1A-218ENST00000640036 ZC3H12BQ5HYM0 836 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms