RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 HDAC3O15379 428 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 MSI1O43347 362 aaKnown RBP14.63□□□□□ -0.07
SCARB2-216ENST00000639300 PEX1O43933 1283 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 USP1O94782 785 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 SOAT1P35610 550 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 P3H2Q8IVL5 708 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 GLIS1Q8NBF1 620 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 FAM13CQ8NE31 585 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 WDR55Q9H6Y2 383 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-216ENST00000639300 ZMYM5Q9UJ78 669 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 PLLPQ9Y342 182 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 BTBD19C9JJ37 291 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 PSMD12O00232 456 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-216ENST00000639300 BPGMP07738 259 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 CYP1B1Q16678 543 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 ARCQ7LC44 396 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 C11orf96Q7Z7L8 435 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 MICU2Q8IYU8 434 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 NLGN2Q8NFZ4 835 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 ELOVL6Q9H5J4 265 aa14.63□□□□□ -0.07
SCARB2-216ENST00000639300 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.63□□□□□ -0.074e-8■■■■■ 28.1
SCARB2-216ENST00000639300 PARP4Q9UKK3 1724 aaKnown RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 HOXA2O43364 376 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 TMEM63AO94886 807 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PARNO95453 639 aaKnown RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 LMO2P25791 158 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 HALP42357 657 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 FSTL1Q12841 308 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 SCIMPQ6UWF3 145 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 HORMAD1Q86X24 394 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 DHFR2Q86XF0 187 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PCDH19Q8TAB3 1148 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 SEPT3Q9UH03 358 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 TMEM59LQ9UK28 342 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 ANKRD6Q9Y2G4 727 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 C2CD4BA6NLJ0 364 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 NFKBIEO00221 500 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 MMP3P08254 477 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PBLDP30039 288 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 NDUFV1P49821 464 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 ZNF135P52742 658 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 NRF1Q16656 503 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 FAM126BQ8IXS8 530 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 CCDC185Q8N715 623 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 MFSD3Q96ES6 412 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 FBXL18Q96ME1 805 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 TWNKQ96RR1 684 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 CHRAC1Q9NRG0 131 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PAPOLBQ9NRJ5 636 aaKnown RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 TTLL13PA6NNM8 815 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 NT5C1B-RDH14C9J2C7 533 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 M0R3G1 203 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 SH3BGRLO75368 114 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 OR4Q2P0C623 313 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 MYL4P12829 197 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 KPNA1P52294 538 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PRKAA2P54646 552 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 WNT3AP56704 352 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 CYP51A1Q16850 503 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PGS1Q32NB8 556 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 TRMT10BQ6PF06 316 aaKnown RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 SLC26A9Q7LBE3 791 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 HDAC10Q969S8 669 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PRPF18Q99633 342 aaKnown RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 SIKE1Q9BRV8 207 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 TM6SF2Q9BZW4 377 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 MINDY3Q9H8M7 445 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 PARVBQ9HBI1 364 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 EXOSC4Q9NPD3 245 aaKnown RBP14.62□□□□□ -0.07
SCARB2-216ENST00000639300 GRIN2DO15399 1336 aa14.62□□□□□ -0.07
SCARB2-216ENST00000639300 HOXC6P09630 235 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 FGFR3P22607 806 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 IL1R2P27930 398 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 FOXN2P32314 431 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 CCNG1P51959 295 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 BNIP1Q12981 228 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 OTOP3Q7RTS5 596 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 PTGR2Q8N8N7 351 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-216ENST00000639300 OR9Q1Q8NGQ5 310 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 YME1L1Q96TA2 773 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 MMADHCQ9H3L0 296 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-216ENST00000639300 FZD8Q9H461 694 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 CNTNAP1P78357 1384 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 PEX11AO75192 247 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 ZNF682O95780 498 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 COX4I1P13073 169 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 ATP5F1P24539 256 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-216ENST00000639300 CYP2C18P33260 490 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 EPHB3P54753 998 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 CA9Q16790 459 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 ADGRD1Q6QNK2 874 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 KCTD15Q96SI1 283 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-216ENST00000639300 RABGEF1Q9UJ41 708 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 SLIT2O94813 1529 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 FGF10O15520 208 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-216ENST00000639300 DAB1O75553 588 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 LTA4HP09960 611 aaKnown RBP14.61□□□□□ -0.07
SCARB2-216ENST00000639300 FASP25445 335 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 PRIM2P49643 509 aa14.61□□□□□ -0.07
SCARB2-216ENST00000639300 CLK1P49759 484 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms