RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TDRD15B5MCY1 1934 aaKnown RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 MAFKO60675 156 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 TRIM13O60858 407 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 CIB2O75838 187 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 OAZ2O95190 189 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 TOP3BO95985 862 aaKnown RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 C2P06681 752 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 TPBGLP0DKB5 382 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 ALOX15P16050 662 aaPredicted RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 AOC1P19801 751 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 CCND3P30281 292 aaPredicted RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 TUBP50607 506 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 RAP1GDS1P52306 607 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 ALDH18A1P54886 795 aaKnown RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 CAP1Q01518 475 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 MTA1Q13330 715 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 OLIG2Q13516 323 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 FSCBQ5H9T9 825 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 CFAP157Q5JU67 520 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 CES4AQ5XG92 561 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 CMC1Q7Z7K0 106 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 ARHGAP12Q8IWW6 846 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 NUP93Q8N1F7 819 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 CNTD1Q8N815 330 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 USP33Q8TEY7 942 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 FAM193BQ96PV7 902 aaPredicted RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 TMEM209Q96SK2 561 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 GPR22Q99680 433 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 APOL2Q9BQE5 337 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 ZCWPW1Q9H0M4 648 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 ZNF395Q9H8N7 513 aaPredicted RBP12.33□□□□□ -0.44
CLN8-212ENST00000637083 ARMCX1Q9P291 453 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 SCML2Q9UQR0 700 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
CLN8-212ENST00000637083 KCNU1A8MYU2 1149 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 E9PAM4 449 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 F8W8V4 182 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 SYN3O14994 580 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 HSPA4LO95757 839 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 TPH1P17752 444 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 NMBRP28336 390 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 MLLT6P55198 1093 aaPredicted RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 MXRA7P84157 204 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ILF2Q12905 390 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 SLC12A1Q13621 1099 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ITGA9Q13797 1035 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 CCDC6Q16204 474 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 TRIM71Q2Q1W2 868 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 HSF5Q4G112 596 aaPredicted RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 TLDC1Q6P9B6 456 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 CNTN4Q8IWV2 1026 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN8-212ENST00000637083 CASP10Q92851 521 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 FATE1Q969F0 183 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 MCMBPQ9BTE3 642 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 FSD1LQ9BXM9 530 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 BATF3Q9NR55 127 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 RBM22Q9NW64 420 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN8-212ENST00000637083 UBP1Q9NZI7 540 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 IL1RAPL1Q9NZN1 696 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 SFMBT1Q9UHJ3 866 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 NEU3Q9UQ49 428 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 TLR6Q9Y2C9 796 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ITM2AO43736 263 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 LYPLA1O75608 230 aaPredicted RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 SNUPNO95149 360 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 PRKCGP05129 697 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 COL6A1P12109 1028 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 GNAZP19086 355 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ELF1P32519 619 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 RENBPP51606 427 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 NDST2P52849 883 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 THOC5Q13769 683 aaKnown RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 RCN2Q14257 317 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 NOMO2Q5JPE7 1267 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 MSANTD2Q6P1R3 559 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 FAM43BQ6ZT52 329 aaPredicted RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 NET1Q7Z628 596 aaPredicted RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 SCD5Q86SK9 330 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ATP6V0D2Q8N8Y2 350 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 IPMKQ8NFU5 416 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 OR6Y1Q8NGX8 325 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 ATXN7L3BQ96GX2 97 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 PRR11Q96HE9 360 aaPredicted RBP12.32□□□□□ -0.44
CLN8-212ENST00000637083 FAM167BQ9BTA0 163 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 FTHL17Q9BXU8 183 aa12.32□□□□□ -0.44
CLN8-212ENST00000637083 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms