RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MS4A13Q5J8X5 152 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 CCDC70Q6NSX1 233 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 WDR93Q6P2C0 686 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 BEND5Q7L4P6 421 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 CREG2Q8IUH2 290 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 CARNMT1Q8N4J0 409 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 KAT5Q92993 513 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 SKA1Q96BD8 255 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 FAM149B1Q96BN6 582 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 SLC39A13Q96H72 371 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 CAPZA3Q96KX2 299 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 MRGPRX3Q96LB0 322 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 ORAI3Q9BRQ5 295 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 TLR10Q9BXR5 811 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 PACSIN1Q9BY11 444 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 DKK4Q9UBT3 224 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 INTS6Q9UL03 887 aaKnown RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 FREM2Q5SZK8 3169 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 ACACAQ13085 2346 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 A0A1W2PPC4 97 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 LRRC72A6NJI9 287 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 H0Y8X5 98 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 FOXN3O00409 490 aaPredicted RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 CES2O00748 559 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 VILLO15195 856 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 SIN3BO75182 1162 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 GPD2P43304 727 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 GALCP54803 685 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 COL9A2Q14055 689 aaPredicted RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 CST6Q15828 149 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 C9orf64Q5T6V5 341 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 MMGT1Q8N4V1 131 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 NOA1Q8NC60 698 aaKnown RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 STK32AQ8WU08 396 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 ACE2Q9BYF1 805 aaPredicted RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 MTG2Q9H4K7 406 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 ST7Q9NRC1 585 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 TPX2Q9ULW0 747 aaKnown RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 CNTN6Q9UQ52 1028 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 ERVW-1Q9UQF0 538 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 WDFY3Q8IZQ1 3526 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 EDDM13A0A1B0GTR0 161 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 GRID2IPA4D2P6 1211 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 FAM47DPA6NHR8 397 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 GOLGA8CPA6NN73 597 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 KCNK3O14649 394 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 ZNF185O15231 689 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 MID1O15344 667 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 LUC7L3O95232 432 aaKnown RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 CALCAP01258 141 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 APOEP02649 317 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 RHOXF2BP0C7M4 288 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 PNMA6AP0CW24 399 aaPredicted RBP12.98□□□□□ -0.33
CTSD-208ENST00000636843 DCAF6Q58WW2 860 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 PITRM1Q5JRX3 1037 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 KCNT1Q5JUK3 1230 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 NCEH1Q6PIU2 408 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 LAYNQ6UX15 382 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 ENOSF1Q7L5Y1 443 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 KRT222Q8N1A0 295 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 OR2T34Q8NGX1 318 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 MYEOVQ96EZ4 313 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 OMDQ99983 421 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 RHOXF2Q9BQY4 288 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
CTSD-208ENST00000636843 APC2O95996 2303 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 A0A1B0GTQ1 180 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 A0A1W2PP55 124 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 PDE2AO00408 941 aaPredicted RBP12.97□□□□□ -0.33
CTSD-208ENST00000636843 CAPN9O14815 690 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 MED7O43513 233 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 MOCS2O96007 188 aaPredicted RBP12.97□□□□□ -0.33
CTSD-208ENST00000636843 SLC8A1P32418 973 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 NOP2P46087 812 aaKnown RBP12.97□□□□□ -0.33
CTSD-208ENST00000636843 CCR5P51681 352 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 ECT2LQ008S8 904 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 FSCBQ5H9T9 825 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 RNF219Q5W0B1 726 aaPredicted RBP12.97□□□□□ -0.33
CTSD-208ENST00000636843 TAC4Q86UU9 113 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 MMAAQ8IVH4 418 aaKnown RBP12.97□□□□□ -0.33
CTSD-208ENST00000636843 LGI2Q8N0V4 545 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 CFAP52Q8N1V2 620 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 TPCN2Q8NHX9 752 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 MDM1Q8TC05 714 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 COG1Q8WTW3 980 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms