RNA–Protein interactions for RNA: ENST00000636473.1

CACNA1A-226, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-226ENST00000636473 PRAMEF11O60813 436 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 MT-CO1P00395 513 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 TIE1P35590 1138 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 KIR2DL1P43626 348 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 SIX1Q15475 284 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 PTPRNQ16849 979 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 C2orf27AQ580R0 203 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 EGFLAMQ63HQ2 1017 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 RETSATQ6NUM9 610 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 LRRC49Q8IUZ0 686 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 ZNF513Q8N8E2 541 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 MAIP1Q8WWC4 291 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 HDAC11Q96DB2 347 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 MRGPRX3Q96LB0 322 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 NELL2Q99435 816 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 CARD6Q9BX69 1037 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 PDFQ9HBH1 243 aa17.15■□□□□ 0.34
CACNA1A-226ENST00000636473 RNF40O75150 1001 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 CD160O95971 181 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 PDGFBP01127 241 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 CHRNB1P11230 501 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 EIF3EP60228 445 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 IL10RBQ08334 325 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 AP1B1Q10567 949 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 ZNF234Q14588 700 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 FBXO43Q4G163 708 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 CREG2Q8IUH2 290 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 FLCNQ8NFG4 579 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 ATG4AQ8WYN0 398 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 TSGA13Q96PP4 275 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 ACOX2Q99424 681 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 NAP1L3Q99457 506 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 LMAN1LQ9HAT1 526 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 SLCO3A1Q9UIG8 710 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 SHROOM3Q8TF72 1996 aa17.14■□□□□ 0.33
CACNA1A-226ENST00000636473 ZSCAN5CA6NGD5 496 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 H7C0C1 242 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 K7ERQ8 282 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 MCF2LO15068 1137 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 SRPRAP08240 638 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 CCNCP24863 283 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 ATP5OP48047 213 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 ST8SIA6P61647 398 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 PPIDQ08752 370 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 LRRC32Q14392 662 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 FNDC3BQ53EP0 1204 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 DGKKQ5KSL6 1271 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 CCDC13Q8IYE1 715 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 PJA1Q8NG27 643 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 TFB1MQ8WVM0 346 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 C1orf54Q8WWF1 131 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 MYO19Q96H55 970 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 C10orf88Q9H8K7 445 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 THAP10Q9P2Z0 257 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 UBA2Q9UBT2 640 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 HS3ST2Q9Y278 367 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 ATG2BQ96BY7 2078 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 SMAD6O43541 496 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 RBP3P10745 1247 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 CHRM1P11229 460 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 SRCP12931 536 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 NNMTP40261 264 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 SERPINH1P50454 418 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 GEMIN4P57678 1058 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 SLC20A2Q08357 652 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 XRCC4Q13426 336 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 FZD5Q13467 585 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 TIGD7Q6NT04 549 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 ZNF572Q7Z3I7 529 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 CHPFQ8IZ52 775 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 SH2D3CQ8N5H7 860 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 BRD8Q9H0E9 1235 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 CACNA2D2Q9NY47 1150 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 FCF1Q9Y324 198 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-226ENST00000636473 TECTAO75443 2155 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 MUC22E2RYF6 1773 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 TMEM221A6NGB7 291 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 HACD1B0YJ81 288 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 WASH3PC4AMC7 463 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 M0R296 226 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 PEX11BO96011 259 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 IL12RB1P42701 662 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 WASP42768 502 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 SNX1Q13596 522 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 PRKD1Q15139 912 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 ACCSLQ4AC99 568 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 SLC45A4Q5BKX6 768 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 DARS2Q6PI48 645 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 SERPINA13PQ6UXR4 307 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 Q6ZS52 159 aa17.12■□□□□ 0.33
CACNA1A-226ENST00000636473 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms