RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RGS20O76081 388 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 LSM8O95777 96 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PDHBP11177 359 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PRLRP16471 622 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CHKAP35790 457 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ARF3P61204 181 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ARF1P84077 181 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MBTD1Q05BQ5 628 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 AP5B1Q2VPB7 878 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CYB5D1Q6P9G0 228 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 DET1Q7L5Y6 550 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 WDR49Q8IV35 697 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FAM84BQ96KN1 310 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF607Q96SK3 696 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SEPHS2Q99611 448 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TBL1YQ9BQ87 522 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CORO1BQ9BR76 489 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FTHL17Q9BXU8 183 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 WHRNQ9P202 907 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 COPS7AQ9UBW8 275 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MYPNQ86TC9 1320 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PDE5AO76074 875 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 OR7A10O76100 309 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ASGR1P07306 291 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CYP2F1P24903 491 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF135P52742 658 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 BACE1P56817 501 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ACSM2AQ08AH3 577 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FCHO2Q0JRZ9 810 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ADIGQ0VDE8 80 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CDH17Q12864 832 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 NECTIN1Q15223 517 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 GRIK4Q16099 956 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 LSM12Q3MHD2 195 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ACSM2BQ68CK6 577 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 RIPOR1Q6ZS17 1223 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SAMD7Q7Z3H4 446 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SNX20Q7Z614 316 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZDHHC13Q8IUH4 622 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ANKFN1Q8N957 763 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF483Q8TF39 744 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 JSRP1Q96MG2 331 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MNTQ99583 582 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SYT15Q9BQS2 421 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ERP44Q9BS26 406 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM9Q9C026 710 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MID1IP1Q9NPA3 183 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PCDHA11Q9Y5I1 949 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MOXD2PA6NHM9 499 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 KLHL41O60662 606 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 RECQL5O94762 991 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 RPA1P27694 616 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MFSD10Q14728 455 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SWI5Q1ZZU3 235 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 GPR158Q5T848 1215 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 IL27RAQ6UWB1 636 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ABRAXAS1Q6UWZ7 409 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TDRPQ86YL5 185 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TREML1Q86YW5 311 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZC3H7AQ8IWR0 971 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 AADATQ8N5Z0 425 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TEX47Q8TBZ9 253 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 DNAJB3Q8WWF6 145 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 UROC1Q96N76 676 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FAM118BQ9BPY3 351 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 POLR1EQ9GZS1 481 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 GULP1Q9UBP9 304 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 UMODL1Q5DID0 1318 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 C15orf38-AP3S2A0A0A6YYH1 394 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PDHXO00330 501 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 O00370 1275 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 BTN3A1O00481 513 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SLC35G4P0C7Q5 338 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 NPR3P17342 541 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ACLYP53396 1101 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ATXN1P54253 815 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 INHBEP58166 350 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 RAPSNQ13702 412 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM164Q5U3C3 297 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ARPINQ7Z6K5 226 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 JAZF1Q86VZ6 243 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FATE1Q969F0 183 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 OSMRQ99650 979 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CPNE1Q99829 537 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 BRD9Q9H8M2 597 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PLEKHA1Q9HB21 404 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CLIC5Q9NZA1 410 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MAT2BQ9NZL9 334 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CDH7Q9ULB5 785 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ST3GAL5Q9UNP4 418 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D30Q9Y2I9 924 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 HECW2Q9P2P5 1572 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 H3BRB1 525 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM38O00635 465 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 APODP05090 189 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM253P0C7T8 217 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TGFB3P10600 412 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MMP13P45452 471 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 NAA20P61599 178 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms