RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 RAP2CQ9Y3L5 183 aa10.9□□□□□ -0.66
PSPC1-207ENST00000635251 SNX10Q9Y5X0 201 aa10.9□□□□□ -0.66
PSPC1-207ENST00000635251 PDHXO00330 501 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 HDAC3O15379 428 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 PHGDHO43175 533 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 CAPN15O75808 1086 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 PIGNO95427 931 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 JCHAINP01591 159 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 USP17L7P0C7H9 530 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 GLDCP23378 1020 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 EPHA3P29320 983 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 CCR10P46092 362 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 GRIA4P48058 902 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 ROR2Q01974 943 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 FRG1Q14331 258 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 UBXN11Q5T124 520 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 LIPMQ5VYY2 423 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 NAPEPLDQ6IQ20 393 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 CTU1Q7Z7A3 348 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 MFN1Q8IWA4 741 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 ARHGAP18Q8N392 663 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 ARRDC4Q8NCT1 418 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 RNF34Q969K3 372 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 CELF6Q96J87 481 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 VAT1Q99536 393 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 EPAS1Q99814 870 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 NUF2Q9BZD4 464 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 WDCPQ9H6R7 721 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 NSMCE4AQ9NXX6 385 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 RGSL1A5PLK6 1076 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 MATN2O00339 956 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 AMHP03971 560 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 HOXD8P13378 290 aaPredicted RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 HADHAP40939 763 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 HCAR3P49019 387 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 SATB1Q01826 763 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 SCAPQ12770 1279 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 SEMA3BQ13214 749 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 MSLNQ13421 630 aaPredicted RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 R3HDM1Q15032 1099 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 LSM12Q3MHD2 195 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 INTS6LQ5JSJ4 861 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 PPM1LQ5SGD2 360 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 KIAA0319Q5VV43 1072 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 IQSEC1Q6DN90 963 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
PSPC1-207ENST00000635251 ZYG11AQ6WRX3 759 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 RDH11Q8TC12 318 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 EDEM1Q92611 657 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 MAML3Q96JK9 1138 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 TKTL2Q9H0I9 626 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 OR12D3Q9UGF7 316 aa10.89□□□□□ -0.67
PSPC1-207ENST00000635251 I6L893 689 aaPredicted RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 AP3B1O00203 1094 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CFLARO15519 480 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 SRGAP2BP0DMP2 458 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 VCLP18206 1134 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 PGGT1BP53609 377 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 NAGLUP54802 743 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 GALNT2Q10471 571 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 SLC12A1Q13621 1099 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CYLC2Q14093 348 aaPredicted RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 MFSD10Q14728 455 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 XKR4Q5GH76 650 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 ARL13AQ5H913 290 aaPredicted RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 BNC2Q6ZN30 1099 aaPredicted RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 GPRIN1Q7Z2K8 1008 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 TMC7Q7Z402 723 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 GPR142Q7Z601 462 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 LINC00523Q86TU6 105 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 FAM35AQ86V20 835 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 KBTBD6Q86V97 674 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 KYQ8NBH2 561 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 SMG8Q8ND04 991 aaKnown RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 KCTD4Q8WVF5 259 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 TEKT5Q96M29 485 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CATSPER2Q96P56 530 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 GPR22Q99680 433 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 SMOQ99835 787 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 TINF2Q9BSI4 451 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 DRC3Q9H069 523 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CNGB3Q9NQW8 809 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 RNF181Q9P0P0 153 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CACNG4Q9UBN1 327 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 PRPF19Q9UMS4 504 aaKnown RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CDYLQ9Y232 598 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 DTNAQ9Y4J8 743 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 TIMM13Q9Y5L4 95 aaPredicted RBP10.88□□□□□ -0.67
PSPC1-207ENST00000635251 C9IYK1 514 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 H3BNX3 289 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 DFFAO00273 331 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 CABYRO75952 493 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 F9P00740 461 aa10.88□□□□□ -0.67
PSPC1-207ENST00000635251 ENO3P13929 434 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms