RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SUCOQ9UBS9 1254 aaKnown RBP5.04□□□□□ -1.6
LINC00550-201ENST00000629293 NUDT5Q9UKK9 219 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 MMP17Q9ULZ9 603 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 DERAQ9Y315 318 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SH3BP1Q9Y3L3 701 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 ATP8B3O60423 1300 aa5.04□□□□□ -1.6
LINC00550-201ENST00000629293 SRRM3A6NNA2 597 aaPredicted RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 A8MXQ7 604 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CLIC2O15247 247 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 AKAP10O43572 662 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 EPHX1P07099 455 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ADH5P11766 374 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CEACAM1P13688 526 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 RDXP35241 583 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 GNL1P36915 607 aaPredicted RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 PCBP4P57723 403 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 BIRC3Q13489 604 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC40Q4G0X9 1142 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TDRD10Q5VZ19 366 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SYT12Q8IV01 421 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM86AQ8N2M4 240 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 RNF10Q8N5U6 811 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC26Q8TAB7 109 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 COG1Q8WTW3 980 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 FBXO32Q969P5 355 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CAPZA3Q96KX2 299 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 HSPA12BQ96MM6 686 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF518BQ9C0D4 1074 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CDH19Q9H159 772 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 PLCB1Q9NQ66 1216 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SIX4Q9UIU6 781 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 NENFQ9UMX5 172 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 RAD54BQ9Y620 910 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MGAQ8IWI9 3026 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 PDCD11Q14690 1871 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 PTPRJQ12913 1337 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 BTNL10A8MVZ5 291 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 AKR1B10O60218 316 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 AKAP3O75969 853 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 HOXB2P14652 356 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TCP1P17987 556 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SOX5P35711 763 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TNNC1P63316 161 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 LMAN2Q12907 356 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TRPC3Q13507 836 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 PCSK7Q16549 785 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 DUOXA2Q1HG44 320 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CFAP221Q4G0U5 840 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 KLHDC7AQ5VTJ3 777 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SFMBT2Q5VUG0 894 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 RHBDF2Q6PJF5 856 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 C14orf80Q86SX3 495 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ADGRG2Q8IZP9 1017 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CBARPQ8N350 705 aaPredicted RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TXLNBQ8N3L3 684 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MINDY1Q8N5J2 469 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SCAMP5Q8TAC9 235 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 FAM71BQ8TC56 605 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 AENQ8WTP8 325 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SLC6A18Q96N87 628 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 OSBPL9Q96SU4 736 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MRPL45Q9BRJ2 306 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TLR10Q9BXR5 811 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 DPEP3Q9H4B8 488 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MED4Q9NPJ6 270 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ENAMQ9NRM1 1142 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 DEC1Q9P2X7 70 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 EBF1Q9UH73 591 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ITGA11Q9UKX5 1188 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 HPCAL4Q9UM19 191 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ARHGAP26Q9UNA1 814 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 HIF3AQ9Y2N7 669 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 HYOU1Q9Y4L1 999 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 COL6A6A6NMZ7 2263 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TRBV23-1A0A0A0MS06 115 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF840PA6NDX5 716 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF233A6NK53 670 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 WASH3PC4AMC7 463 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 NEDD8-MDP1E9PL57 170 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 PDXKO00764 312 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 GABRDO14764 452 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SLC16A3O15427 465 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TBX18O95935 607 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 LDHAP00338 332 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MYBL2P10244 700 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TNFRSF8P28908 595 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ADH7P40394 386 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MAGEA1P43355 309 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 NEK2P51955 445 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CACNA2D1P54289 1103 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF33AQ06730 810 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 C2orf54Q08AI8 447 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF460Q14592 562 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SLC18A3Q16572 532 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 NFIL3Q16649 462 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 KNOP1Q1ED39 458 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 EOGTQ5NDL2 527 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TAF3Q5VWG9 929 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 GPD1LQ8N335 351 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms