RNA–Protein interactions for RNA: ENST00000627680.2

CCNC-219, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-219ENST00000627680 ATP13A1Q9HD20 1204 aa18.23■□□□□ 0.51
CCNC-219ENST00000627680 FSCN3Q9NQT6 498 aa18.23■□□□□ 0.51
CCNC-219ENST00000627680 EIF2B4Q9UI10 523 aaKnown RBP18.23■□□□□ 0.51
CCNC-219ENST00000627680 CBX4O00257 560 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 ARHGAP33O14559 1287 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 HNRNPH3P31942 346 aaKnown RBP18.22■□□□□ 0.51
CCNC-219ENST00000627680 DRD3P35462 400 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 ACVRL1P37023 503 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 GALCP54803 685 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 ARF5P84085 180 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 FAM46CQ5VWP2 391 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 DAB2IPQ5VWQ8 1189 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 OR2A12Q8NGT7 310 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 ARHGEF2Q92974 986 aaKnown RBP18.22■□□□□ 0.51
CCNC-219ENST00000627680 BIRC7Q96CA5 298 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 EPAS1Q99814 870 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCNC-219ENST00000627680 TRIM7Q9C029 511 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 MIR1-1HGQ9H1L0 117 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 MAGEH1Q9H213 219 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 MRPL47Q9HD33 250 aaKnown RBP18.22■□□□□ 0.51
CCNC-219ENST00000627680 DNAI1Q9UI46 699 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 SARDHQ9UL12 918 aa18.22■□□□□ 0.51
CCNC-219ENST00000627680 WASH4PA8MWX3 477 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 BCAT2O15382 392 aaPredicted RBP18.21■□□□□ 0.51
CCNC-219ENST00000627680 RAMP2O60895 175 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 ZNF821O75541 412 aaPredicted RBP18.21■□□□□ 0.51
CCNC-219ENST00000627680 CD160O95971 181 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 SYPP08247 313 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 EPHB2P29323 1055 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 HTR7P34969 479 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 SERPINH1P50454 418 aaKnown RBP18.21■□□□□ 0.51
CCNC-219ENST00000627680 KIAA0895LQ68EN5 471 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 C22orf39Q6P5X5 142 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 ZCCHC9Q8N567 271 aaKnown RBP18.21■□□□□ 0.51
CCNC-219ENST00000627680 RTL3Q8N8U3 475 aaKnown RBP18.21■□□□□ 0.51
CCNC-219ENST00000627680 RNF214Q8ND24 703 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 OR2T34Q8NGX1 318 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 CCDC114Q96M63 670 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 CEP44Q9C0F1 390 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 OSGEPQ9NPF4 335 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 ARHGAP20Q9P2F6 1191 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 MYO1AQ9UBC5 1043 aa18.21■□□□□ 0.51
CCNC-219ENST00000627680 FARP1Q9Y4F1 1045 aaPredicted RBP18.21■□□□□ 0.51
CCNC-219ENST00000627680 A0A087X0T9 212 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 LRRC72A6NJI9 287 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 EIF3CLB5ME19 914 aaKnown RBP18.2■□□□□ 0.5
CCNC-219ENST00000627680 C1QTNF3-AMACRE9PGA6 284 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 SLC7A4O43246 635 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 CREB3O43889 395 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 RNF8O76064 485 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 FSBPO95073 299 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 IGHV4-34P06331 123 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 FAM228BP0C875 321 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 CD27P26842 260 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 MAPK8P45983 427 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 METAP1P53582 386 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 ATXN3P54252 364 aaPredicted RBP18.2■□□□□ 0.5
CCNC-219ENST00000627680 TRIM14Q14142 442 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 NCEH1Q6PIU2 408 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 TMIEQ8NEW7 156 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 PIP4K2CQ8TBX8 421 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 SNX19Q92543 992 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 EIF3CQ99613 913 aaKnown RBP18.2■□□□□ 0.5
CCNC-219ENST00000627680 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 ORAI3Q9BRQ5 295 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 ZDHHC5Q9C0B5 715 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 NOL6Q9H6R4 1146 aaKnown RBP18.2■□□□□ 0.5
CCNC-219ENST00000627680 CATSPERBQ9H7T0 1116 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 AP4E1Q9UPM8 1137 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 SLCO1B1Q9Y6L6 691 aa18.2■□□□□ 0.5
CCNC-219ENST00000627680 MED19A0JLT2 244 aaPredicted RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 BNIP3LO60238 219 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 LRCH4O75427 683 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 CTSLP07711 333 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 MIPP30301 263 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 CHRNA3P32297 505 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 ADPRHP54922 357 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 ACAP1Q15027 740 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 POLD3Q15054 466 aaPredicted RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 PPM1JQ5JR12 505 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 ERMARDQ5T6L9 678 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 ALKBH5Q6P6C2 394 aaKnown RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 CYP4V2Q6ZWL3 525 aaPredicted RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 VSTM4Q8IW00 320 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 MINDY1Q8N5J2 469 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 PCDH20Q8N6Y1 951 aaKnown RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 OR14C36Q8NHC7 312 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 ISG20Q96AZ6 181 aaKnown RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 PEBP4Q96S96 227 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 GTPBP2Q9BX10 602 aaKnown RBP18.19■□□□□ 0.5
CCNC-219ENST00000627680 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 TNKS2Q9H2K2 1166 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 KDM4CQ9H3R0 1056 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 GPATCH2LQ9NWQ4 482 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 NENFQ9UMX5 172 aa18.19■□□□□ 0.5
CCNC-219ENST00000627680 FAM47DPA6NHR8 397 aa18.18■□□□□ 0.5
CCNC-219ENST00000627680 FGF10O15520 208 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms