RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZMPSTE24O75844 475 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 RNF8O76064 485 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 PSMD8P48556 350 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 GALCP54803 685 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 TRIM14Q14142 442 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 TDRD12Q587J7 1177 aaKnown RBP22.86■■□□□ 1.25
SF1-220ENST00000626028 SCYL2Q6P3W7 929 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 PSTKQ8IV42 348 aaKnown RBP22.86■■□□□ 1.25
SF1-220ENST00000626028 PLPP6Q8IY26 295 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 OR2T34Q8NGX1 318 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 ISG20Q96AZ6 181 aaKnown RBP22.86■■□□□ 1.25
SF1-220ENST00000626028 BIRC7Q96CA5 298 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 NEUROG2Q9H2A3 272 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 C6orf106Q9H6K1 298 aaPredicted RBP22.86■■□□□ 1.25
SF1-220ENST00000626028 ATP13A1Q9HD20 1204 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 CNOT8Q9UFF9 292 aaKnown RBP22.86■■□□□ 1.25
SF1-220ENST00000626028 EIF2B4Q9UI10 523 aaKnown RBP22.86■■□□□ 1.25
SF1-220ENST00000626028 HPCAL4Q9UM19 191 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 A0A1W2PP55 124 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 ZSCAN5CA6NGD5 496 aaPredicted RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 WASH4PA8MWX3 477 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 FAM72CH0Y354 149 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 CBX4O00257 560 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 FGF10O15520 208 aaPredicted RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 SNAP91O60641 907 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 GYPCP04921 128 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 SKILP12757 684 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 VAV1P15498 845 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 CSRP1P21291 193 aaKnown RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 PSMA2P25787 234 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 CD27P26842 260 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 MAOBP27338 520 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 HNRNPH3P31942 346 aaKnown RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 SERPINH1P50454 418 aaKnown RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 CCR5P51681 352 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 AFF3P51826 1226 aaKnown RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 ZNF135P52742 658 aaPredicted RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 SEMA3BQ13214 749 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 SLC14A1Q13336 389 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 FAM72AQ5TYM5 149 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 KIAA0895LQ68EN5 471 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 FAM72DQ6L9T8 149 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 IL27RAQ6UWB1 636 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 Q6ZVU0 165 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 FAM72BQ86X60 149 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 HDDC3Q8N4P3 179 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 AADATQ8N5Z0 425 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 TMIEQ8NEW7 156 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 OR7D4Q8NG98 312 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 SPON2Q9BUD6 331 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 CATSPERBQ9H7T0 1116 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 DNAAF2Q9NVR5 837 aaKnown RBP22.85■■□□□ 1.25
SF1-220ENST00000626028 TMEM131Q92545 1883 aa22.85■■□□□ 1.25
SF1-220ENST00000626028 CABIN1Q9Y6J0 2220 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 MT-CO1P00395 513 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 EPHB2P29323 1055 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 NUDT1P36639 197 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 RECQLP46063 649 aaPredicted RBP22.84■■□□□ 1.25
SF1-220ENST00000626028 YBEYP58557 167 aaPredicted RBP22.84■■□□□ 1.25
SF1-220ENST00000626028 OGDHQ02218 1023 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 PPM1JQ5JR12 505 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 PCDH20Q8N6Y1 951 aaKnown RBP22.84■■□□□ 1.25
SF1-220ENST00000626028 RTL3Q8N8U3 475 aaKnown RBP22.84■■□□□ 1.25
SF1-220ENST00000626028 OR2A12Q8NGT7 310 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 ARHGEF2Q92974 986 aaKnown RBP22.84■■□□□ 1.25
SF1-220ENST00000626028 ZNF653Q96CK0 615 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 XPO4Q9C0E2 1151 aaKnown RBP22.84■■□□□ 1.25
SF1-220ENST00000626028 MIR1-1HGQ9H1L0 117 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 DOCK9Q9BZ29 2069 aa22.84■■□□□ 1.25
SF1-220ENST00000626028 RAMP2O60895 175 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 PRNPP04156 253 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 DRD3P35462 400 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 ADPRHP54922 357 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 TEAD4Q15561 434 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 SPECC1LQ69YQ0 1117 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 C22orf39Q6P5X5 142 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 ZCCHC9Q8N567 271 aaKnown RBP22.83■■□□□ 1.25
SF1-220ENST00000626028 PIP4K2CQ8TBX8 421 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 SERGEFQ9UGK8 458 aa22.83■■□□□ 1.25
SF1-220ENST00000626028 OPHN1O60890 802 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 IGHV4-34P06331 123 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 CHRNA3P32297 505 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 GRIA4P48058 902 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 NUMBP49757 651 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 ARF5P84085 180 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 POLD3Q15054 466 aaPredicted RBP22.82■■□□□ 1.24
SF1-220ENST00000626028 ERMARDQ5T6L9 678 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 NCEH1Q6PIU2 408 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 MINDY1Q8N5J2 469 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 CPLX3Q8WVH0 158 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 CASKIN2Q8WXE0 1202 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 SNX19Q92543 992 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.82■■□□□ 1.246e-6■■□□□ 11.9
SF1-220ENST00000626028 DNAI1Q9UI46 699 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 TRPM6Q9BX84 2022 aa22.82■■□□□ 1.24
SF1-220ENST00000626028 K7ERQ8 282 aa22.81■■□□□ 1.24
SF1-220ENST00000626028 ATMINO43313 823 aaPredicted RBP22.81■■□□□ 1.24
SF1-220ENST00000626028 SMAD6O43541 496 aaKnown RBP22.81■■□□□ 1.24
SF1-220ENST00000626028 PLRG1O43660 514 aaKnown RBP22.81■■□□□ 1.24
SF1-220ENST00000626028 FSBPO95073 299 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms