RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 A6NNZ2 444 aa15.06■□□□□ 0
PNKP-218ENST00000625299 E5RJQ4 531 aa15.06■□□□□ 0
PNKP-218ENST00000625299 SCAMP1O15126 338 aa15.06■□□□□ 0
PNKP-218ENST00000625299 WISP1O95388 367 aa15.06■□□□□ 0
PNKP-218ENST00000625299 CTSLP07711 333 aa15.06■□□□□ 0
PNKP-218ENST00000625299 GPD2P43304 727 aa15.06■□□□□ 0
PNKP-218ENST00000625299 ACADSBP45954 432 aa15.06■□□□□ 0
PNKP-218ENST00000625299 PMS1P54277 932 aaKnown RBP15.06■□□□□ 0
PNKP-218ENST00000625299 ZNF177Q13360 481 aaPredicted RBP15.06■□□□□ 0
PNKP-218ENST00000625299 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
PNKP-218ENST00000625299 KIF26BQ2KJY2 2108 aa15.06■□□□□ 0
PNKP-218ENST00000625299 ZSCAN23Q3MJ62 389 aa15.06■□□□□ 0
PNKP-218ENST00000625299 SEL1L3Q68CR1 1132 aa15.06■□□□□ 0
PNKP-218ENST00000625299 ANKRD40Q6AI12 368 aa15.06■□□□□ 0
PNKP-218ENST00000625299 FBXL22Q6P050 247 aa15.06■□□□□ 0
PNKP-218ENST00000625299 CCDC81Q6ZN84 652 aa15.06■□□□□ 0
PNKP-218ENST00000625299 EFL1Q7Z2Z2 1120 aaKnown RBP15.06■□□□□ 0
PNKP-218ENST00000625299 HSCBQ8IWL3 235 aa15.06■□□□□ 0
PNKP-218ENST00000625299 GRIN3AQ8TCU5 1115 aa15.06■□□□□ 0
PNKP-218ENST00000625299 FEM1AQ9BSK4 669 aa15.06■□□□□ 0
PNKP-218ENST00000625299 MUC3BQ9H195 1237 aa15.06■□□□□ 0
PNKP-218ENST00000625299 GOLPH3LQ9H4A5 285 aa15.06■□□□□ 0
PNKP-218ENST00000625299 USP29Q9HBJ7 922 aa15.06■□□□□ 0
PNKP-218ENST00000625299 DDIT4Q9NX09 232 aa15.06■□□□□ 0
PNKP-218ENST00000625299 VANGL2Q9ULK5 521 aa15.06■□□□□ 0
PNKP-218ENST00000625299 TRPM6Q9BX84 2022 aa15.05■□□□□ 0
PNKP-218ENST00000625299 A0A1W2PNU3 283 aaPredicted RBP15.05■□□□□ -0
PNKP-218ENST00000625299 PMS2P1A4D2B8 440 aa15.05■□□□□ -0
PNKP-218ENST00000625299 K7ENP7 123 aa15.05■□□□□ -0
PNKP-218ENST00000625299 IGLV3-25P01717 112 aa15.05■□□□□ -0
PNKP-218ENST00000625299 KRT5P13647 590 aa15.05■□□□□ -0
PNKP-218ENST00000625299 CHRNA3P32297 505 aa15.05■□□□□ -0
PNKP-218ENST00000625299 HNRNPKP61978 463 aaKnown RBP eCLIP15.05■□□□□ -0
PNKP-218ENST00000625299 YWHAZP63104 245 aaKnown RBP15.05■□□□□ -0
PNKP-218ENST00000625299 KRT85P78386 507 aa15.05■□□□□ -0
PNKP-218ENST00000625299 PNOCQ13519 176 aa15.05■□□□□ -0
PNKP-218ENST00000625299 DRAP1Q14919 205 aaPredicted RBP15.05■□□□□ -0
PNKP-218ENST00000625299 TAF5Q15542 800 aa15.05■□□□□ -0
PNKP-218ENST00000625299 NEK5Q6P3R8 708 aa15.05■□□□□ -0
PNKP-218ENST00000625299 GUSBP11Q6P575 273 aa15.05■□□□□ -0
PNKP-218ENST00000625299 INO80CQ6PI98 192 aaPredicted RBP15.05■□□□□ -0
PNKP-218ENST00000625299 BEND5Q7L4P6 421 aa15.05■□□□□ -0
PNKP-218ENST00000625299 ARHGEF19Q8IW93 802 aa15.05■□□□□ -0
PNKP-218ENST00000625299 ATP11CQ8NB49 1132 aa15.05■□□□□ -0
PNKP-218ENST00000625299 ZNF548Q8NEK5 533 aaPredicted RBP15.05■□□□□ -0
PNKP-218ENST00000625299 ALG14Q96F25 216 aa15.05■□□□□ -0
PNKP-218ENST00000625299 CCDC97Q96F63 343 aaPredicted RBP15.05■□□□□ -0
PNKP-218ENST00000625299 CCDC114Q96M63 670 aa15.05■□□□□ -0
PNKP-218ENST00000625299 TRIM4Q9C037 500 aa15.05■□□□□ -0
PNKP-218ENST00000625299 SYNDIG1Q9H7V2 258 aa15.05■□□□□ -0
PNKP-218ENST00000625299 ZFR2Q9UPR6 939 aaKnown RBP15.05■□□□□ -0
PNKP-218ENST00000625299 HEMK1Q9Y5R4 338 aaPredicted RBP15.05■□□□□ -0
PNKP-218ENST00000625299 SPTA1P02549 2419 aa15.05■□□□□ -0
PNKP-218ENST00000625299 COL27A1Q8IZC6 1860 aaPredicted RBP15.04■□□□□ -0
PNKP-218ENST00000625299 FAM237AA0A1B0GTK4 181 aa15.04■□□□□ -0
PNKP-218ENST00000625299 H3BM21 787 aa15.04■□□□□ -0
PNKP-218ENST00000625299 RNF103O00237 685 aa15.04■□□□□ -0
PNKP-218ENST00000625299 SNAP91O60641 907 aa15.04■□□□□ -0
PNKP-218ENST00000625299 ZNF202O95125 648 aa15.04■□□□□ -0
PNKP-218ENST00000625299 MT-CO1P00395 513 aa15.04■□□□□ -0
PNKP-218ENST00000625299 SLC2A3P11169 496 aa15.04■□□□□ -0
PNKP-218ENST00000625299 SRCP12931 536 aa15.04■□□□□ -0
PNKP-218ENST00000625299 CCR1P32246 355 aa15.04■□□□□ -0
PNKP-218ENST00000625299 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
PNKP-218ENST00000625299 CDK17Q00537 523 aa15.04■□□□□ -0
PNKP-218ENST00000625299 CCDC15Q0P6D6 951 aa15.04■□□□□ -0
PNKP-218ENST00000625299 NFATC3Q12968 1075 aa15.04■□□□□ -0
PNKP-218ENST00000625299 AUHQ13825 339 aaKnown RBP15.04■□□□□ -0
PNKP-218ENST00000625299 DEFB133Q30KQ1 61 aa15.04■□□□□ -0
PNKP-218ENST00000625299 CCDC40Q4G0X9 1142 aa15.04■□□□□ -0
PNKP-218ENST00000625299 ZCCHC8Q6NZY4 707 aaKnown RBP15.04■□□□□ -0
PNKP-218ENST00000625299 RBM44Q6ZP01 1051 aaKnown RBP15.04■□□□□ -0
PNKP-218ENST00000625299 ABI3BPQ7Z7G0 1075 aa15.04■□□□□ -0
PNKP-218ENST00000625299 SNRNP27Q8WVK2 155 aaKnown RBP15.04■□□□□ -0
PNKP-218ENST00000625299 IFT43Q96FT9 208 aa15.04■□□□□ -0
PNKP-218ENST00000625299 SLC46A1Q96NT5 459 aa15.04■□□□□ -0
PNKP-218ENST00000625299 MED15Q96RN5 788 aa15.04■□□□□ -0
PNKP-218ENST00000625299 FAM117AQ9C073 453 aa15.04■□□□□ -0
PNKP-218ENST00000625299 RMND1Q9NWS8 449 aa15.04■□□□□ -0
PNKP-218ENST00000625299 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
PNKP-218ENST00000625299 IPO11Q9UI26 975 aaKnown RBP15.04■□□□□ -0
PNKP-218ENST00000625299 ENTPD2Q9Y5L3 495 aa15.04■□□□□ -0
PNKP-218ENST00000625299 K7ERQ8 282 aa15.03■□□□□ -0
PNKP-218ENST00000625299 MUSKO15146 869 aa15.03■□□□□ -0
PNKP-218ENST00000625299 PRNPP04156 253 aa15.03■□□□□ -0
PNKP-218ENST00000625299 RRM1P23921 792 aa15.03■□□□□ -0
PNKP-218ENST00000625299 RPL34P49207 117 aaKnown RBP15.03■□□□□ -0
PNKP-218ENST00000625299 KRT83P78385 493 aa15.03■□□□□ -0
PNKP-218ENST00000625299 CETN1Q12798 172 aa15.03■□□□□ -0
PNKP-218ENST00000625299 NME3Q13232 169 aa15.03■□□□□ -0
PNKP-218ENST00000625299 ARSIQ5FYB1 569 aa15.03■□□□□ -0
PNKP-218ENST00000625299 C6orf132Q5T0Z8 1188 aa15.03■□□□□ -0
PNKP-218ENST00000625299 IGF2-ASQ6U949 168 aa15.03■□□□□ -0
PNKP-218ENST00000625299 ERN2Q76MJ5 926 aaKnown RBP15.03■□□□□ -0
PNKP-218ENST00000625299 PARGQ86W56 976 aa15.03■□□□□ -0
PNKP-218ENST00000625299 DEFB106AQ8N104 65 aa15.03■□□□□ -0
PNKP-218ENST00000625299 ARL14Q8N4G2 192 aa15.03■□□□□ -0
PNKP-218ENST00000625299 CHST14Q8NCH0 376 aa15.03■□□□□ -0
PNKP-218ENST00000625299 OR2A12Q8NGT7 310 aa15.03■□□□□ -0
PNKP-218ENST00000625299 LMX1AQ8TE12 382 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms