RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CCR1P32246 355 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 CHRNA3P32297 505 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 CDK17Q00537 523 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 NME3Q13232 169 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 MORC3Q14149 939 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 SETMARQ53H47 684 aaPredicted RBP11.33□□□□□ -0.6
DDX41-218ENST00000625286 ZNF542PQ5EBM4 170 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 RABGAP1LQ5R372 815 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 FAM46CQ5VWP2 391 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 SEL1L3Q68CR1 1132 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 OLFML1Q6UWY5 402 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 GCNT7Q6ZNI0 430 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 LRRC69Q6ZNQ3 347 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 FAM183BPQ6ZVS7 135 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 TMC6Q7Z403 805 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 OR4C6Q8NH72 309 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 VOPP1Q96AW1 172 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 HIC2Q96JB3 615 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 BMFQ96LC9 184 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 CRACR2AQ9BSW2 395 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
DDX41-218ENST00000625286 PREBQ9HCU5 417 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 PIGVQ9NUD9 493 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 KLHL11Q9NVR0 708 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 HS3ST2Q9Y278 367 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 ATP6V1DQ9Y5K8 247 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 DOCK4Q8N1I0 1966 aa11.33□□□□□ -0.6
DDX41-218ENST00000625286 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 BIN1O00499 593 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 RAD51BO15315 384 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 OPA1O60313 960 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 PIAS2O75928 621 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 NEBLO76041 1014 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 CKMT1AP12532 417 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 NUDT1P36639 197 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 CETN1Q12798 172 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 TPRG1LQ5T0D9 272 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 TTC39BQ5VTQ0 682 aaPredicted RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 DPY19L2P1Q6NXN4 242 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 TRIM65Q6PJ69 517 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 LINGO4Q6UY18 593 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 GPR155Q7Z3F1 870 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 DSG4Q86SJ6 1040 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 HORMAD1Q86X24 394 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 LSM14AQ8ND56 463 aaKnown RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 RNF34Q969K3 372 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
DDX41-218ENST00000625286 PPP1R13BQ96KQ4 1090 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 SEMA4CQ9C0C4 833 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 SIK2Q9H0K1 926 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 ASNSD1Q9NWL6 643 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 SLC12A6Q9UHW9 1150 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 VPS51Q9UID3 782 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 KLF15Q9UIH9 416 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 SLC25A13Q9UJS0 675 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 VPS28Q9UK41 221 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 ACTL7AQ9Y615 435 aa11.32□□□□□ -0.6
DDX41-218ENST00000625286 FAM170AA1A519 330 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 POM121BA6NF01 834 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 DRGXA6NNA5 263 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 C1QTNF3-AMACRE9PGA6 284 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 MED7O43513 233 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 CLDN11O75508 207 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 GLI1P08151 1106 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 PNMA6AP0CW24 399 aaPredicted RBP11.31□□□□□ -0.6
DDX41-218ENST00000625286 SLC2A3P11169 496 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 ZNF18P17022 549 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 ACTN2P35609 894 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 CXCR3P49682 368 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 CDH4P55283 916 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 CXADRP78310 365 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 E2F1Q01094 437 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 STIM1Q13586 685 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 FZD2Q14332 565 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 ARHGAP44Q17R89 818 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 PTPN20Q4JDL3 420 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 ARSIQ5FYB1 569 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 EFHC1Q5JVL4 640 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 OR6B2Q6IFH4 312 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 TRNP1Q6NT89 227 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 DPY19L3Q6ZPD9 716 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 Q6ZSR6 202 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 ABI3BPQ7Z7G0 1075 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 ELOA2Q8IYF1 753 aaPredicted RBP11.31□□□□□ -0.6
DDX41-218ENST00000625286 C1orf131Q8NDD1 294 aaKnown RBP11.31□□□□□ -0.6
DDX41-218ENST00000625286 TMIEQ8NEW7 156 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 SHC3Q92529 594 aa11.31□□□□□ -0.6
DDX41-218ENST00000625286 BAP1Q92560 729 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms