RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 EFEMP1Q12805 493 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 MS4A13Q5J8X5 152 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 C16orf46Q6P387 395 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 CRIPAKQ8N1N5 446 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 UMODL1-AS1Q8N2C9 162 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SPATA17Q96L03 361 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 TLR8Q9NR97 1041 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SNX15Q9NRS6 342 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 C20orf96Q9NUD7 363 aaPredicted RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 RBM22Q9NW64 420 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 HEY2Q9UBP5 337 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 IPO11Q9UI26 975 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 CCDC195A0A1B0GUA6 201 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 DNAJC6O75061 913 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SOAT2O75908 522 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 TARSP26639 723 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SERPINB8P50452 374 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 NDST2P52849 883 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 CSE1LP55060 971 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SMARCB1Q12824 385 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 ELAVL2Q12926 359 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 TRIP4Q15650 581 aaPredicted RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 ANO4Q32M45 955 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 FASTKD1Q53R41 847 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 FSTL4Q6MZW2 842 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 CCDC117Q8IWD4 279 aaPredicted RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 PLCD3Q8N3E9 789 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 ATP6V0D2Q8N8Y2 350 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 MCMBPQ9BTE3 642 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 ZYG11BQ9C0D3 744 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 LRMDAQ9H2I8 198 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SAR1AQ9NR31 198 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 DONSONQ9NYP3 566 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 HCSTQ9UBK5 93 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 SLC27A5Q9Y2P5 690 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 MRPL42Q9Y6G3 142 aaKnown RBP20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 NUMBLQ9Y6R0 609 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 GREB1Q4ZG55 1949 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 IGLV3-10A0A075B6K4 115 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 HOXA2O43364 376 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 MYCP01106 439 aaPredicted RBP20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 KRT16P08779 473 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 ADRA1AP35348 466 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 TAF10Q12962 218 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 STX3Q13277 289 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 MPP3Q13368 585 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 SNCBQ16143 134 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 CTC1Q2NKJ3 1217 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 PPM1JQ5JR12 505 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 PCID2Q5JVF3 399 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 DENND5AQ6IQ26 1287 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 RSPO2Q6UXX9 243 aaPredicted RBP20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 CCDC91Q7Z6B0 441 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 NPAS4Q8IUM7 802 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 IPMKQ8NFU5 416 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 FATE1Q969F0 183 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 SKA1Q96BD8 255 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 BTN2A3PQ96KV6 586 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 CRISPLD1Q9H336 500 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 ENTPD7Q9NQZ7 604 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 TMEM248Q9NWD8 314 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 COMMD8Q9NX08 183 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 WBP1LQ9NX94 342 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 TET1Q8NFU7 2136 aa20.05■□□□□ 0.8
PCDHB11-202ENST00000624887 VNN2O95498 520 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 TBX18O95935 607 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 PRKCGP05129 697 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 GALTP07902 379 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 MYL2P10916 166 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 IRX4P78413 519 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 CDK18Q07002 472 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 RIPK1Q13546 671 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 PSMD5Q16401 504 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 TCTN1Q2MV58 587 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 MGAT5BQ3V5L5 792 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 RTP2Q5QGT7 225 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 PDPK2PQ6A1A2 396 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 PKN3Q6P5Z2 889 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 RNF19BQ6ZMZ0 732 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 INPP5DQ92835 1189 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 AZIN2Q96A70 460 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 ZNF778Q96MU6 729 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 SEPT5Q99719 369 aaPredicted RBP20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 TMEM175Q9BSA9 504 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 FICDQ9BVA6 458 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 MRPL9Q9BYD2 267 aaKnown RBP20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 THAP1Q9NVV9 213 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 NSMCE4AQ9NXX6 385 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 KCNK4Q9NYG8 393 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 HAO1Q9UJM8 370 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 H7C4K7 107 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 TIMM44O43615 452 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 PROCP04070 461 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 HAPLN1P10915 354 aaPredicted RBP20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 RASIP1Q5U651 963 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 MBLAC2Q68D91 279 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 CMC1Q7Z7K0 106 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms