RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 GEMP55040 296 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 IFT88Q13099 833 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 MTA1Q13330 715 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 NAB1Q13506 487 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 HNRNPDQ14103 355 aaKnown RBP13.47□□□□□ -0.25
C3orf56-201ENST00000624688 ITIH4Q14624 930 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 ZKSCAN8Q15776 578 aaPredicted RBP13.47□□□□□ -0.25
C3orf56-201ENST00000624688 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
C3orf56-201ENST00000624688 ANO4Q32M45 955 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 HECTD3Q5T447 861 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 CDHR3Q6ZTQ4 885 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 RASSF3Q86WH2 238 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 LGI2Q8N0V4 545 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
C3orf56-201ENST00000624688 CDKL2Q92772 493 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 PSMG2Q969U7 264 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 ZNF669Q96BR6 464 aaPredicted RBP13.47□□□□□ -0.25
C3orf56-201ENST00000624688 MFSD3Q96ES6 412 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 TRMT2BQ96GJ1 504 aaKnown RBP13.47□□□□□ -0.25
C3orf56-201ENST00000624688 CHRAC1Q9NRG0 131 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 DONSONQ9NYP3 566 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 SOX13Q9UN79 622 aa13.47□□□□□ -0.25
C3orf56-201ENST00000624688 MAGEB16A2A368 324 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 AP3B1O00203 1094 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 KLKB1P03952 638 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 URODP06132 367 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 RAG1P15918 1043 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 CNTFP26441 200 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 ALDH1A3P47895 512 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 MAPKAPK2P49137 400 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 TNK2Q07912 1038 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 SLC10A7Q0GE19 358 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 PLD1Q13393 1074 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 MROH9Q5TGP6 573 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 RFWD3Q6PCD5 774 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
C3orf56-201ENST00000624688 TMEM199Q8N511 208 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 TEX26Q8N6G2 289 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 IPMKQ8NFU5 416 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 FICDQ9BVA6 458 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 KIFC1Q9BW19 673 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 MKS1Q9NXB0 559 aa13.46□□□□□ -0.25
C3orf56-201ENST00000624688 MYLKQ15746 1914 aa13.46□□□□□ -0.26
C3orf56-201ENST00000624688 ANAPC1Q9H1A4 1944 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 C2orf78A6NCI8 922 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 F5H5T6 163 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 RAMP2O60895 175 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 LILRB3O75022 631 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 STC2O76061 302 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 LINC00271P0C7V0 271 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 DNAJB2P25686 324 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 NMBRP28336 390 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 ACVRL1P37023 503 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 RENBPP51606 427 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 TWF1Q12792 350 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 SERINC3Q13530 473 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 IHHQ14623 411 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 POLD3Q15054 466 aaPredicted RBP13.45□□□□□ -0.26
C3orf56-201ENST00000624688 PARP15Q460N3 678 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 KDELC1Q6UW63 502 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 TMEM150AQ86TG1 271 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 TCEAL8Q8IYN2 117 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 CFAP52Q8N1V2 620 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 ZNF75CPQ92670 426 aaPredicted RBP13.45□□□□□ -0.26
C3orf56-201ENST00000624688 WBP2Q969T9 261 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 PLD4Q96BZ4 506 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 PPP1R2P1Q96PQ5 205 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 FAM111AQ96PZ2 611 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 SRPK1Q96SB4 655 aaKnown RBP13.45□□□□□ -0.26
C3orf56-201ENST00000624688 YME1L1Q96TA2 773 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
C3orf56-201ENST00000624688 NACA2Q9H009 215 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 SLC25A51Q9H1U9 297 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 VPS11Q9H270 941 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 SP110Q9HB58 689 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 TRPM5Q9NZQ8 1165 aa13.45□□□□□ -0.26
C3orf56-201ENST00000624688 H3BNC9 293 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 COPEO14579 308 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 PMPCBO75439 489 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 BAIAP3O94812 1187 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 MMP2P08253 660 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
C3orf56-201ENST00000624688 OR1E1P30953 314 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 CORO7P57737 925 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 YBEYP58557 167 aaPredicted RBP13.44□□□□□ -0.26
C3orf56-201ENST00000624688 IL10RBQ08334 325 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 MPP3Q13368 585 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 TEDDM1Q5T9Z0 273 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 MARC1Q5VT66 337 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 RANBP10Q6VN20 620 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 FAM47EQ6ZV65 393 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 OTOP2Q7RTS6 562 aa13.44□□□□□ -0.26
C3orf56-201ENST00000624688 NECAB2Q7Z6G3 386 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms