RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CENPXA8MT69 81 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 hCG_2039718K7EN88 272 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 SGK1O00141 431 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 APEHP13798 732 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 MATN1P21941 496 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 MS4A2Q01362 244 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 GALK2Q01415 458 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TUBB3Q13509 450 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PXDC1Q5TGL8 231 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PPP1R18Q6NYC8 613 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DGLUCYQ7Z3D6 616 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TCAIMQ8N3R3 496 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PHTF2Q8N3S3 785 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DACT3Q96B18 629 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 SNX18Q96RF0 628 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ZNF341Q9BYN7 854 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 C20orf27Q9GZN8 174 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 EHMT1Q9H9B1 1298 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 C20orf96Q9NUD7 363 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 MAU2Q9Y6X3 613 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 WDR90Q96KV7 1748 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 KDM3AQ9Y4C1 1321 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ENPP3O14638 875 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 AKAP10O43572 662 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 SNNO75324 88 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 BCAS2O75934 225 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 ASNSP08243 561 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 WEE2P0C1S8 567 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CCNCP24863 283 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CCND2P30279 289 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 EVI2BP34910 448 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 GRM5P41594 1212 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CASP3P42574 277 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 B2MP61769 119 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 IFITM3Q01628 133 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TRIM32Q13049 653 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 KLF10Q13118 480 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ART3Q13508 389 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DLG2Q15700 870 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ECM1Q16610 540 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 COL13A1Q5TAT6 717 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 RNASEH2BQ5TBB1 312 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 SLFN13Q68D06 897 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 RINT1Q6NUQ1 792 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 GLRX5Q86SX6 157 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DSELQ8IZU8 1212 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PDIK1LQ8N165 341 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 TP53INP1Q96A56 240 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 SDCCAG3Q96C92 435 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DYNLL2Q96FJ2 89 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CNDP2Q96KP4 475 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 KLHL32Q96NJ5 620 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 RPRD1BQ9NQG5 326 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 PIH1D1Q9NWS0 290 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 PKD2L1Q9P0L9 805 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DNMT3BQ9UBC3 853 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 MTRRQ9UBK8 725 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TOR1BO14657 336 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 LYPLA1O75608 230 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 GCNT3O95395 438 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 BPGMP07738 259 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 SNRPAP09012 282 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 AKR1B1P15121 316 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ATF4P18848 351 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 CFL1P23528 166 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 IDH3AP50213 366 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 NME5P56597 212 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PRKCEQ02156 737 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TNFAIP2Q03169 654 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CDK10Q15131 360 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 MTX3Q5HYI7 312 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TRAPPC3LQ5T215 181 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 FAM205BPQ63HN1 556 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 KIAA1841Q6NSI8 718 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 UNC5AQ6ZN44 842 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PRR23BQ6ZRT6 265 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CEP68Q76N32 757 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ARCQ7LC44 396 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 PTAR1Q7Z6K3 402 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CADM2Q8N3J6 435 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 FAM109AQ8N4B1 249 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 SIMC1Q8NDZ2 872 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 CYGBQ8WWM9 190 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TFAP2CQ92754 450 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 RBM18Q96H35 190 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 MMP19Q99542 508 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 TMEM206Q9H813 350 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 GPN2Q9H9Y4 310 aaPredicted RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 ADPRHL2Q9NX46 363 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 ENPP5Q9UJA9 477 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 DNPEPQ9ULA0 475 aa8.04□□□□□ -1.12
VPS11-209ENST00000622309 EIF3LQ9Y262 564 aaKnown RBP8.04□□□□□ -1.12
VPS11-209ENST00000622309 ATAD5Q96QE3 1844 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms