RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PTPN5P54829 565 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 GEMIN4P57678 1058 aaKnown RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 CAMK2GQ13555 558 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 NT5DC3Q86UY8 548 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 RASSF3Q86WH2 238 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 VSIG1Q86XK7 387 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 ARHGAP12Q8IWW6 846 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 RCOR2Q8IZ40 523 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 MDGA1Q8NFP4 955 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-245ENST00000621399 IRF2BPLQ9H1B7 796 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 ZSCAN32Q9NX65 697 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 EBF1Q9UH73 591 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 PCDHA3Q9Y5H8 950 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
CIRBP-245ENST00000621399 CACNA1IQ9P0X4 2223 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 CXorf51AA0A1B0GTR3 108 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 CCDC66A2RUB6 948 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 ZNF487B1APH4 448 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 AXIN1O15169 862 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 SMAD6O43541 496 aaKnown RBP18.96■□□□□ 0.63
CIRBP-245ENST00000621399 SIN3BO75182 1162 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 FTCDO95954 541 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 GABRG2P18507 467 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 CTNNA2P26232 953 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 SERPINH1P50454 418 aaKnown RBP18.96■□□□□ 0.63
CIRBP-245ENST00000621399 C9orf64Q5T6V5 341 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 NCBP2-AS2Q69YL0 99 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 MFSD7Q6UXD7 560 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 LONP2Q86WA8 852 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 PQLC3Q8N755 202 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 OR2T3Q8NH03 318 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 EXD1Q8NHP7 514 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 FRS2Q8WU20 508 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 TPSD1Q9BZJ3 242 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 ACTL7AQ9Y615 435 aa18.96■□□□□ 0.63
CIRBP-245ENST00000621399 CCDC163A0A0D9SF12 145 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 BNIP3LO60238 219 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 VAV1P15498 845 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 NDUFV2P19404 249 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 RWDD2BP57060 319 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 PAFAH1B3Q15102 231 aaKnown RBP18.95■□□□□ 0.62
CIRBP-245ENST00000621399 SPOCD1Q6ZMY3 1216 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 WDR5BQ86VZ2 330 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 RFX6Q8HWS3 928 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 TMPRSS6Q8IU80 811 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 CCDC50Q8IVM0 306 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 TP53INP2Q8IXH6 220 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 NELL1Q92832 810 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 ATOH1Q92858 354 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-245ENST00000621399 PTPRN2Q92932 1015 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 RBM41Q96IZ5 413 aaKnown RBP18.95■□□□□ 0.62
CIRBP-245ENST00000621399 MRGPRX1Q96LB2 322 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 CEP44Q9C0F1 390 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 MKRN2Q9H000 416 aaKnown RBP18.95■□□□□ 0.62
CIRBP-245ENST00000621399 SLC6A17Q9H1V8 727 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 FBRSQ9HAH7 460 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 PRDM16Q9HAZ2 1276 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 FCF1Q9Y324 198 aaKnown RBP18.95■□□□□ 0.62
CIRBP-245ENST00000621399 PCDHGA2Q9Y5H1 932 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 WDFY4Q6ZS81 3184 aa18.95■□□□□ 0.62
CIRBP-245ENST00000621399 MIF4GDA9UHW6 222 aaKnown RBP18.94■□□□□ 0.62
CIRBP-245ENST00000621399 J3KR12 359 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 APOL1O14791 398 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 ZSCAN12O43309 604 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 PRAMEF11O60813 436 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 RNASEH1O60930 286 aaKnown RBP18.94■□□□□ 0.62
CIRBP-245ENST00000621399 CD160O95971 181 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 CDKN2BP42772 138 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 PEX5P50542 639 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 COPAP53621 1224 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 C22orf39Q6P5X5 142 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 KIAA1324Q6UXG2 1013 aaKnown RBP18.94■□□□□ 0.62
CIRBP-245ENST00000621399 ARHGAP36Q6ZRI8 547 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 Q6ZVU0 165 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 UBL4BQ8N7F7 174 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 PRCCQ92733 491 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-245ENST00000621399 ALS2CR12Q96Q35 445 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 TNKS2Q9H2K2 1166 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 SP110Q9HB58 689 aa18.94■□□□□ 0.62
CIRBP-245ENST00000621399 IPO11Q9UI26 975 aaKnown RBP18.94■□□□□ 0.62
CIRBP-245ENST00000621399 PACSIN2Q9UNF0 486 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-245ENST00000621399 MYO18AQ92614 2054 aaKnown RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 MFSD11O43934 449 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 KRT10P13645 584 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 ZFXP17010 805 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 RECQLP46063 649 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 DNA2P51530 1060 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 DYNLT1P63172 113 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 GBE1Q04446 702 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 IL10RBQ08334 325 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 ELAVL3Q14576 367 aaKnown RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 LLGL1Q15334 1064 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 TAZQ16635 292 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 USP39Q53GS9 565 aaKnown RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 INO80DQ53TQ3 878 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-245ENST00000621399 TFDP3Q5H9I0 405 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 KAZNQ674X7 775 aa18.93■□□□□ 0.62
CIRBP-245ENST00000621399 SLC9A4Q6AI14 798 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms