RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 WASHC2DQ5SRD0 308 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 DENND1CQ8IV53 801 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 SYTL1Q8IYJ3 562 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 COLGALT1Q8NBJ5 622 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 THTPAQ9BU02 230 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 CLPBQ9H078 707 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 XYLT2Q9H1B5 865 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 Q9H521 79 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 SAR1AQ9NR31 198 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 NRCAMQ92823 1304 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ALDH1A2O94788 518 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 SNRPAP09012 282 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ALDH9A1P49189 494 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 CDK16Q00536 496 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 RASA2Q15283 850 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 CYTH1Q15438 398 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 FNDC3BQ53EP0 1204 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 DET1Q7L5Y6 550 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 FIBCD1Q8N539 461 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 DBF4BQ8NFT6 615 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 MED8Q96G25 268 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ZNF558Q96NG5 402 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ZNF395Q9H8N7 513 aaPredicted RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 BPIFA1Q9NP55 256 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 BRWD3Q6RI45 1802 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 F9P00740 461 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 LTFP02788 710 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 HMGCRP04035 888 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 PTPN1P18031 435 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 GPC1P35052 558 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 CENPAP49450 140 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC16A1P53985 500 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 ELAVL2Q12926 359 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UGP2Q16851 508 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 KCNT2Q6UVM3 1135 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SERPINA13PQ6UXR4 307 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 ZCCHC23Q6ZST2 131 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC26A11Q86WA9 606 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 OOSP2Q86WS3 158 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UBR7Q8N806 425 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 OXNAD1Q96HP4 312 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 PEBP4Q96S96 227 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 NMUR2Q9GZQ4 415 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 ELOVL4Q9GZR5 314 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SDCBP2Q9H190 292 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 RHBGQ9H310 441 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 MPP6Q9NZW5 540 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 KANSL3Q9P2N6 904 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 HNRNPCL2B2RXH8 293 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 C5orf58C9J3I9 102 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 GSC2O15499 205 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UGT1A9O60656 530 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 HNRNPCL1O60812 293 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SOAT2O75908 522 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 LMNAP02545 664 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SERPINF2P08697 491 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 MCF2P10911 925 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 CYP2C18P33260 490 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 ABL2P42684 1182 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 HSPA14Q0VDF9 509 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SGCGQ13326 291 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 NOMO2Q5JPE7 1267 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 NOL9Q5SY16 702 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 TTC39BQ5VTQ0 682 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SNX30Q5VWJ9 437 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 NAIF1Q69YI7 327 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 RETSATQ6NUM9 610 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 RINLQ6ZS11 566 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 CDHR3Q6ZTQ4 885 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 STRA8Q7Z7C7 330 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC44A1Q8WWI5 657 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 RELTQ969Z4 430 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 PIWIL1Q96J94 861 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 THUMPD3Q9BV44 507 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 ASPSCR1Q9BZE9 553 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UGT1A7Q9HAW7 530 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UGT1A10Q9HAW8 530 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 UGT1A8Q9HAW9 530 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 CDY1Q9Y6F8 540 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SYCE1LA8MT33 242 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 CXorf49A8MYA2 514 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 HALP42357 657 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 ACOX1Q15067 660 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM154Q6P9G4 183 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 TRAPPC5Q8IUR0 188 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 GALNT4Q8N4A0 578 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 C1orf127Q8N9H9 656 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC4A11Q8NBS3 891 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 E2F7Q96AV8 911 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 TUBB6Q9BUF5 446 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 FRMD8P1Q9BZ68 369 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 FAF1Q9UNN5 650 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 EFR3BQ9Y2G0 817 aa8.41□□□□□ -1.06
PTPDC1-204ENST00000620992 MSI1O43347 362 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ANXA9O76027 345 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ATG7O95352 703 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SEMG2Q02383 582 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms