RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ZSCAN5DPP0CG00 497 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CCNB1P14635 433 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 SP100P23497 879 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PTPN3P26045 913 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 IVDP26440 423 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 HLA-FP30511 346 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CD70P32970 193 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RPL22P35268 128 aaKnown RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ACTN2P35609 894 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CSKP41240 450 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 SLC6A11P48066 632 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RENBPP51606 427 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 GDF10P55107 478 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 IFI35P80217 286 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 SLC20A2Q08357 652 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 WASHC5Q12768 1159 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PTK6Q13882 451 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 DMC1Q14565 340 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RFTN1Q14699 578 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 AAK1Q2M2I8 961 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ERCC6LQ2NKX8 1250 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 GAB4Q2WGN9 574 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 P3H1Q32P28 736 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ITPRIPL2Q3MIP1 535 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TMCO4Q5TGY1 634 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 DUPD1Q68J44 220 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 C4orf22Q6V702 233 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PID1Q7Z2X4 250 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PRUNE1Q86TP1 453 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PACS2Q86VP3 889 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ZNF354CQ86Y25 554 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 APCDD1Q8J025 514 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 SLC44A3Q8N4M1 653 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CPA6Q8N4T0 437 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TEX26Q8N6G2 289 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CCDC89Q8N998 374 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 GLIS1Q8NBF1 620 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 MAFAQ8NHW3 353 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 CCHCR1Q8TD31 782 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 NSMCE1Q8WV22 266 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 SEC14L1Q92503 715 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ACDQ96AP0 544 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TEKT5Q96M29 485 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 IL12RB2Q99665 862 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RHOXF2Q9BQY4 288 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RAB17Q9H0T7 212 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 BRD9Q9H8M2 597 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 KCNK12Q9HB15 430 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 PCDH9Q9HC56 1237 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ATP13A1Q9HD20 1204 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TRPV5Q9NQA5 729 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 ABCB8Q9NUT2 735 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 RBM22Q9NW64 420 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 GTSE1Q9NYZ3 720 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 DEC1Q9P2X7 70 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 VPS28Q9UK41 221 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TRHDEQ9UKU6 1024 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 INTS6Q9UL03 887 aaKnown RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 SLC27A6Q9Y2P4 619 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 UTP11Q9Y3A2 253 aaKnown RBP8.19□□□□□ -1.1
CPNE3-209ENST00000620393 MYO16Q9Y6X6 1858 aa8.19□□□□□ -1.1
CPNE3-209ENST00000620393 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 A0A0A0MRY4 1105 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 LOC730098B7Z3J9 87 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 RNF103O00237 685 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 CBX4O00257 560 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TRIM24O15164 1050 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ZBTB24O43167 697 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 CTIFO43310 598 aaKnown RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TIMM44O43615 452 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SNAP91O60641 907 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 OPHN1O60890 802 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TULP3O75386 442 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 HEXIM1O94992 359 aaKnown RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 CD160O95971 181 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ITIH2P19823 946 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 GLDCP23378 1020 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 GJA4P35212 333 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ADCY8P40145 1251 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 DGKGP49619 791 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 NRLP54845 237 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ARF5P84085 180 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 GUCY2DQ02846 1103 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TFF2Q03403 129 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SULT2A1Q06520 285 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 SLC10A7Q0GE19 358 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 NAA30Q147X3 362 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 CYTH1Q15438 398 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PARP6Q2NL67 630 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PLEKHG6Q3KR16 790 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 INO80DQ53TQ3 878 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-209ENST00000620393 PITRM1Q5JRX3 1037 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ANKRD20A2Q5SQ80 823 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ANKRD20A1Q5TYW2 823 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 MARC1Q5VT66 337 aa8.18□□□□□ -1.1
CPNE3-209ENST00000620393 ANKRD20A3Q5VUR7 823 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms