RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 EDC4Q6P2E9 1401 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TFECO14948 347 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 MAGEC1O60732 1142 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ZBTB7AO95365 584 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 HLA-DRAP01903 254 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RBM34P42696 430 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 CNTN2Q02246 1040 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ABRQ12979 859 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 WDR72Q3MJ13 1102 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SCARA5Q6ZMJ2 495 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SV2AQ7L0J3 742 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RHOUQ7L0Q8 258 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 NATD1Q8N6N6 113 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 HDAC2Q92769 488 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 SLC39A1Q9NY26 324 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ZNF624Q9P2J8 865 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PRKAG2Q9UGJ0 569 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RPS6KA4O75676 772 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GALK1P51570 392 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RAB4BP61018 213 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MAP1SQ66K74 1059 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 DEPDC1BQ8WUY9 529 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ANKEF1Q9NU02 776 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 DNAAF2Q9NVR5 837 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ZNF69Q9UC07 566 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SNX7Q9UNH6 387 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SLC28A2O43868 658 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SOX30O94993 753 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ATXN1P54253 815 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PDK3Q15120 406 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CHI3L2Q15782 390 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SMTNL2Q2TAL5 461 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 EFHC1Q5JVL4 640 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MOB2Q70IA6 237 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SRFBP1Q8NEF9 429 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 DENND1AQ8TEH3 1009 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 AAR2Q9Y312 384 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ALDH1B1P30837 517 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 NPTX2P47972 431 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BCAR1P56945 870 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GALNT3Q14435 633 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 LIN52Q52LA3 116 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 C12orf56Q8IXR9 622 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CAMKK1Q8N5S9 505 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ACVR1CQ8NER5 493 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RMND5AQ9H871 391 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GCNT4Q9P109 453 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 AURKCQ9UQB9 309 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ATP10AO60312 1499 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 KNL1Q8NG31 2342 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 UNC13AQ9UPW8 1703 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ZBTB11O95625 1053 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TGM6O95932 706 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PSMC5P62195 406 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 NFX1Q12986 1120 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PTPRRQ15256 657 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TSNQ15631 228 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PCK2Q16822 640 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ZCCHC8Q6NZY4 707 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 MTURNQ8N3F0 131 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PYDC1Q8WXC3 89 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MXRA8Q9BRK3 442 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 C20orf27Q9GZN8 174 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 UNKLQ9H9P5 680 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ITM2BQ9Y287 266 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 UGT2A1Q9Y4X1 527 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PRKD3O94806 890 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PABPC4LP0CB38 370 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 CLUP10909 449 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 HLA-DPA1P20036 260 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CYP3A7P24462 503 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TRIM23P36406 574 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RHEBQ15382 184 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 C7orf57Q8NEG2 295 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PJA1Q8NG27 643 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ATXN7L3BQ96GX2 97 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MASTLQ96GX5 879 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ZSWIM3Q96MP5 696 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CD93Q9NPY3 652 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 C3orf18Q9UK00 162 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 VAV3Q9UKW4 847 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 DCAF8L1A6NGE4 600 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TRIM49D1C9J1S8 452 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 VNN2O95498 520 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ERVK-10P10266 1014 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CYP11B1P15538 503 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CBX3Q13185 183 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PLCZ1Q86YW0 608 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 WDR49Q8IV35 697 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PARP8Q8N3A8 854 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 NPLOC4Q8TAT6 608 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SPATA16Q9BXB7 569 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CXorf21Q9HAI6 301 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GNPTGQ9UJJ9 305 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PSME2Q9UL46 239 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FARP1Q9Y4F1 1045 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 RPTORQ8N122 1335 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ATP6V1B1P15313 513 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 HES5Q5TA89 166 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms