RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MTSS1O43312 755 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 HAUS5O94927 633 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 CDH17Q12864 832 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 MPP3Q13368 585 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 ZNF460Q14592 562 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 TEDDM1Q5T9Z0 273 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 ATG16L1Q676U5 607 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 ASRGL1Q7L266 308 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 DENND6AQ8IWF6 608 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
CIITA-212ENST00000618207 IPO11Q9UI26 975 aaKnown RBP12.63□□□□□ -0.39
CIITA-212ENST00000618207 ARHGEF37A1IGU5 675 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 ENPP3O14638 875 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 HAPLN1P10915 354 aaPredicted RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 ALDH18A1P54886 795 aaKnown RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 ITGA9Q13797 1035 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 TCTN1Q2MV58 587 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 BRMS1LQ5PSV4 323 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 ESRP1Q6NXG1 681 aaKnown RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 RNF19BQ6ZMZ0 732 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 MON1AQ86VX9 555 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CRLF3Q8IUI8 442 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 SLC7A6OSQ96CW6 309 aaPredicted RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 SERPINB11Q96P15 392 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 HAPLN3Q96S86 360 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 TBC1D10AQ9BXI6 508 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 NYNRINQ9P2P1 1898 aaKnown RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 A0A096LPK6 155 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 SLC12A8A0AV02 714 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 TBKBP1A7MCY6 615 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CCL22O00626 93 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 PLIN3O60664 434 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 GJB3O75712 270 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 OAZ2O95190 189 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 ALDH2P05091 517 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 SLC11A1P49279 550 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 MLLT6P55198 1093 aaPredicted RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 COG7P83436 770 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CNGA3Q16281 694 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 NFE2Q16621 373 aaPredicted RBP12.62□□□□□ -0.39
CIITA-212ENST00000618207 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 ATG14Q6ZNE5 492 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 LONP2Q86WA8 852 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CFAP52Q8N1V2 620 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 PPP1R36Q96LQ0 422 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 RBBP8Q99708 897 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CPNE1Q99829 537 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 TBL1YQ9BQ87 522 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 GLOD4Q9HC38 313 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 SIRPGQ9P1W8 387 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 CASP8AP2Q9UKL3 1982 aa12.62□□□□□ -0.39
CIITA-212ENST00000618207 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 ARVCFO00192 962 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 FCHO1O14526 889 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 GLRA3O75311 464 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 USP1O94782 785 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 CCNCP24863 283 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 YWHAQP27348 245 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 SPRP35270 261 aaPredicted RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 MPP1Q00013 466 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 CCDC15Q0P6D6 951 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 EIF4EBP2Q13542 120 aaPredicted RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 FAM117BQ6P1L5 589 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 AGAP11Q8TF27 550 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 HMCESQ96FZ2 354 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 VAT1Q99536 393 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 OXCT2Q9BYC2 517 aaPredicted RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 BRD8Q9H0E9 1235 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 DNAJC16Q9Y2G8 782 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 SCN5AQ14524 2016 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 GSRP00390 522 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 ENO1P06733 434 aaKnown RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 SELPP16109 830 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 CNTFP26441 200 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 OCRLQ01968 901 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 SLC10A7Q0GE19 358 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 GRM3Q14832 879 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 GPNMBQ14956 572 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 PCLAFQ15004 111 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 MS4A13Q5J8X5 152 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 TMCO2Q7Z6W1 182 aaPredicted RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 IGSF8Q969P0 613 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 PSMG2Q969U7 264 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 MYEOVQ96EZ4 313 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 VPS39Q96JC1 886 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 RPRD1AQ96P16 312 aaPredicted RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 TACO1Q9BSH4 297 aaKnown RBP12.61□□□□□ -0.39
CIITA-212ENST00000618207 TRIM62Q9BVG3 475 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 SHCBP1LQ9BZQ2 653 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 TMEM161AQ9NX61 479 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 MARCH2Q9P0N8 246 aa12.61□□□□□ -0.39
CIITA-212ENST00000618207 RAD54BQ9Y620 910 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms