RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 TEX28O15482 410 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 BNC1Q01954 994 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 FAM83EQ2M2I3 478 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 RAVER1Q8IY67 606 aaKnown RBP11.09□□□□□ -0.63
POLR2A-209ENST00000617998 GPR156Q8NFN8 814 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 QRFPRQ96P65 431 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 BCAS3Q9H6U6 928 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 IL36AQ9UHA7 158 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CDC14AQ9UNH5 594 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CD72P21854 359 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 GALCP54803 685 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 BTN2A2Q8WVV5 523 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 SHC3Q92529 594 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CTNNAL1Q9UBT7 734 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CYP3A7-CYP3A51PA0A087WV96 503 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CYP3A7P24462 503 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.63
POLR2A-209ENST00000617998 SYCE1LA8MT33 242 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.63
POLR2A-209ENST00000617998 PLGP00747 810 aaPredicted RBP11.08□□□□□ -0.63
POLR2A-209ENST00000617998 ALPPP05187 535 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 PRIM2P49643 509 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 CERCAMQ5T4B2 595 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 LYPLAL1Q5VWZ2 237 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 POMGNT2Q8NAT1 580 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 KLHL32Q96NJ5 620 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 TBCBQ99426 244 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 SLAMF7Q9NQ25 335 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 RIC8BQ9NVN3 520 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 GGA2Q9UJY4 613 aa11.08□□□□□ -0.63
POLR2A-209ENST00000617998 CCDC188H7C350 402 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 ZNF24P17028 368 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 AMPD1P23109 780 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 NFATC2Q13469 925 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 GSTA3Q16772 222 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 UBE2E3Q969T4 207 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SPDL1Q96EA4 605 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 FCRL2Q96LA5 508 aaPredicted RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 FBRSL1Q9HCM7 1045 aaKnown RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 GDE1Q9NZC3 331 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 PADI2Q9Y2J8 665 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SNX24Q9Y343 169 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 LEFTY2O00292 366 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 MAPK1P28482 360 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 CDH4P55283 916 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SNIP1Q8TAD8 396 aaKnown RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 ELMO3Q96BJ8 720 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 NTSR1P30989 418 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 STX4Q12846 297 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 EFL1Q7Z2Z2 1120 aaKnown RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SH3RF1Q7Z6J0 888 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SLC35F6Q8N357 371 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SIDT2Q8NBJ9 832 aaKnown RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 RPLP0P6Q8NHW5 317 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 NDC1Q9BTX1 674 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 BPIFA1Q9NP55 256 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 KCNMB3Q9NPA1 279 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 CHCHD3Q9NX63 227 aaKnown RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 VTI1BQ9UEU0 232 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 ABRQ12979 859 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 POU6F1Q14863 301 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 MLF2Q15773 248 aaPredicted RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 LY6G5CQ5SRR4 150 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 DACT3Q96B18 629 aaPredicted RBP11.08□□□□□ -0.64
POLR2A-209ENST00000617998 FMO2Q99518 471 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SEMA3CQ99985 751 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 KAT7O95251 611 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 CD86P42081 329 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 SNF8Q96H20 258 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 VPS18Q9P253 973 aa11.08□□□□□ -0.64
POLR2A-209ENST00000617998 CLDN4O14493 209 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MUSKO15146 869 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 CCNT2O60583 730 aaKnown RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 TIPRLO75663 272 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MYOGP15173 224 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PTPN5P54829 565 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 CRY1Q16526 586 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MANEAQ5SRI9 462 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 SLC9B2Q86UD5 537 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 ATCAYQ86WG3 371 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 CNPY4Q8N129 248 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 VCX3AQ9NNX9 186 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 GNPTGQ9UJJ9 305 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 MRTO4Q9UKD2 239 aaKnown RBP11.07□□□□□ -0.64
POLR2A-209ENST00000617998 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 RAD51BO15315 384 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 PAGE1O75459 146 aa11.07□□□□□ -0.64
POLR2A-209ENST00000617998 HNRNPKP61978 463 aaKnown RBP eCLIP11.07□□□□□ -0.642e-14■■■■□ 24
POLR2A-209ENST00000617998 PKP1Q13835 747 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms