RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 COL1A2P08123 1366 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 C1orf232A0A0U1RR37 186 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 LIASO43766 372 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 PFKFB4Q16877 469 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 IRAK1BP1Q5VVH5 260 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 RIN3Q8TB24 985 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 TRPC4APQ8TEL6 797 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 MIR1-1HGQ9H1L0 117 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 POMKQ9H5K3 350 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 ALG9Q9H6U8 611 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 NDUFAF1Q9Y375 327 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 CHADO15335 359 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 TAF10Q12962 218 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 TMEM154Q6P9G4 183 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 MAML3Q96JK9 1138 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 ZNF670Q9BS34 389 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 SEMA4BQ9NPR2 832 aaPredicted RBP18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 ANKRD6Q9Y2G4 727 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 H3BMM5 538 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 NQO1P15559 274 aaKnown RBP18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 HLA-DQA1Q5Y7H0 255 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 BBS12Q6ZW61 710 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 TRIM69Q86WT6 500 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 SEPHS2Q99611 448 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 RERGLQ9H628 205 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 TLE6Q9H808 572 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 H3BQF6 201 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 DEAF1O75398 565 aaPredicted RBP18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 MARSP56192 900 aaKnown RBP18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 HYIQ5T013 277 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 NAT16Q8N8M0 369 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 LRRN4CLQ8ND94 238 aa18.78■□□□□ 0.6
AC008878.3-201ENST00000617428 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 MYOCQ99972 504 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 NOD2Q9HC29 1040 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 CCDC167Q9P0B6 97 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 VTI1BQ9UEU0 232 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 PCDHB9Q9Y5E1 797 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 hCG_2014768A0A024R1R8 64 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 B4GALT4O60513 344 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 CCDC166P0CW27 439 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 CCT8P50990 548 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 NAGLUP54802 743 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 FASTKQ14296 549 aaKnown RBP18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 CRYMQ14894 314 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 ATAD3BQ5T9A4 648 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 IL27RAQ6UWB1 636 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 RNF148Q8N7C7 305 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 POU5F2Q8N7G0 328 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 MAGEC3Q8TD91 643 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 BSNDQ8WZ55 320 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 FIG4Q92562 907 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 KCTD14Q9BQ13 255 aaPredicted RBP18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 KRCC1Q9NPI7 259 aaPredicted RBP18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 COL20A1Q9P218 1284 aa18.77■□□□□ 0.6
AC008878.3-201ENST00000617428 A0A0U1RQJ8 604 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 PIGNO95427 931 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 PIK3CGP48736 1102 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 CDK7P50613 346 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 PRKAA2P54646 552 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 PTPRNQ16849 979 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 LRP10Q7Z4F1 713 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 LRRC49Q8IUZ0 686 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 STAG3L4Q8TBR4 150 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 CERS2Q96G23 380 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 FGFBP2Q9BYJ0 223 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 TMEM245Q9H330 911 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 SLC24A3Q9HC58 644 aa18.77■□□□□ 0.59
AC008878.3-201ENST00000617428 FCHO1O14526 889 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 NDUFS2O75306 463 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 ANXA5P08758 320 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 TBL3Q12788 808 aaKnown RBP18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 TNFRSF25Q93038 417 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 REPS1Q96D71 796 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 AASDHPPTQ9NRN7 309 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 KLQ9UEF7 1012 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 BMP10O95393 424 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 AMD1P17707 334 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 CFAP52Q8N1V2 620 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 JOSD2Q8TAC2 188 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 VPS33AQ96AX1 596 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 RHBGQ9H310 441 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 ANKDD1BA6NHY2 528 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 SNTNA6NMZ2 147 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 FAM47E-STBD1D6RA91 191 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 ZW10O43264 779 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 CTPS1P17812 591 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 CLK2P49760 499 aaKnown RBP18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 STXBP5Q5T5C0 1151 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 VN1R5Q7Z5H4 357 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 MTFMTQ96DP5 389 aaKnown RBP18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 NSMCE2Q96MF7 247 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 AGO1Q9UL18 857 aaKnown RBP18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 TPP1O14773 563 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 C12orf56Q8IXR9 622 aa18.76■□□□□ 0.59
AC008878.3-201ENST00000617428 UBXN8O00124 270 aa18.75■□□□□ 0.59
AC008878.3-201ENST00000617428 LAG3P18627 525 aa18.75■□□□□ 0.59
AC008878.3-201ENST00000617428 CDC25CP30307 473 aa18.75■□□□□ 0.59
AC008878.3-201ENST00000617428 TAS2R40P59535 323 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms