RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZBTB17Q13105 803 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 HIC1Q14526 733 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CRY1Q16526 586 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 C6orf10Q5SRN2 563 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 TTC7BQ86TV6 843 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 DTX3LQ8TDB6 740 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 BRSK1Q8TDC3 778 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 MRPL45Q9BRJ2 306 aaKnown RBP9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 C3orf14Q9HBI5 128 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 SNX6Q9UNH7 406 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 CORO2BQ9UQ03 480 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PCDHB1Q9Y5F3 818 aa9.89□□□□□ -0.83
TNFRSF9-204ENST00000615230 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 EEF1B2P24534 225 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 TNFSF9P41273 254 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 IL2P60568 153 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CBX2Q14781 532 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CBWD6Q4V339 395 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 RALGPS1Q5JS13 557 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 C1orf146Q5VVC0 180 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PTAR1Q7Z6K3 402 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 DNAAF5Q86Y56 855 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 NPLOC4Q8TAT6 608 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 HERC2P3Q9BVR0 1158 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 MANSC1Q9H8J5 431 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PCDHGC3Q9UN70 934 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 KDM3BQ7LBC6 1761 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 LTBP4Q8N2S1 1624 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 A0A0U1RQF3 1178 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 RASSF10A6NK89 507 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CILPO75339 1184 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCNB1P14635 433 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 ATP6V1C1P21283 382 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 LPOP22079 712 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 LAPTM5Q13571 262 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 BOP1Q14137 746 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZC3H14Q6PJT7 736 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 RBFAQ8N0V3 343 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 AHI1Q8N157 1196 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 FERD3LQ96RJ6 166 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 ELAC2Q9BQ52 826 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 FBRSQ9HAH7 460 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 GMIPQ9P107 970 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 HES2Q9Y543 173 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 RGPD5Q99666 1765 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PIGRP01833 764 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SOD2P04179 222 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 HK2P52789 917 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PNLIPRP1P54315 467 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SRSF11Q05519 484 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 DSELQ8IZU8 1212 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 FBXO39Q8N4B4 442 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 DACT3Q96B18 629 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CEP295NLQ96MC4 621 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 FZD8Q9H461 694 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 C4AP0C0L4 1744 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 F2P00734 622 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PIM1P11309 404 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 GTF2A1P52655 376 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SLC5A3P53794 718 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 LRRC74AQ0VAA2 488 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CDC16Q13042 620 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 TRIM69Q86WT6 500 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 GPR135Q8IZ08 494 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 C7orf57Q8NEG2 295 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 DNAJC19Q96DA6 116 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 HEPHQ9BQS7 1158 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 CNTN3Q9P232 1028 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 NDRG2Q9UN36 371 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 ARL2BPQ9Y2Y0 163 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 TRIM49D1C9J1S8 452 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SUPT7LO94864 414 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SEC31AO94979 1220 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 GUCA1CO95843 209 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 NDUFS1P28331 727 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 DNAJC3Q13217 504 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 MEA1Q16626 185 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 GSTA3Q16772 222 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 ATP6AP1LQ52LC2 224 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SGO1Q5FBB7 561 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 C10orf53Q8N6V4 93 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PPP1R10Q96QC0 940 aaKnown RBP9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 PADI4Q9UM07 663 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 SOX13Q9UN79 622 aa9.88□□□□□ -0.83
TNFRSF9-204ENST00000615230 A0A087X0T9 212 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 C16orf96A6NNT2 1141 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 DNALI1O14645 258 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 PJA2O43164 708 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 RAD51CO43502 376 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 FAM228BP0C875 321 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 HSD17B2P37059 387 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 CLCN6P51797 869 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 EEF1DP3Q658K8 133 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 GALNT13Q8IUC8 556 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 BBS4Q96RK4 519 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ASB8Q9H765 288 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 RHPN2P1A8MT19 583 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 NT5C1B-RDH14C9J2C7 533 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms