RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PRR23CQ6ZRP0 262 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ZSWIM9Q86XI8 627 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ZCCHC9Q8N567 271 aaKnown RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ACRBPQ8NEB7 543 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ARHGEF2Q92974 986 aaKnown RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ARRDC3Q96B67 414 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 DESI2Q9BSY9 194 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 CNPY3Q9BT09 278 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ZYG11BQ9C0D3 744 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 SLC39A8Q9C0K1 460 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 C10orf88Q9H8K7 445 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ATP13A1Q9HD20 1204 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ITM2CQ9NQX7 267 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 FBXL12Q9NXK8 326 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 USP36Q9P275 1121 aaKnown RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 PLXND1Q9Y4D7 1925 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 BCLAF3A2AJT9 711 aaKnown RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 SCAMP1O15126 338 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 CAVIN2O95810 425 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 IGHV4-34P06331 123 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 PRLRP16471 622 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 L1CAMP32004 1257 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 SLC8A1P32418 973 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 CDH4P55283 916 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 CLDN6P56747 220 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 GSCP56915 257 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 TRIM61Q5EBN2 209 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ARSIQ5FYB1 569 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 KCTD16Q68DU8 428 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF354CQ86Y25 554 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 KIAA1958Q8N8K9 716 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 PRCCQ92733 491 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ZC3H10Q96K80 434 aaKnown RBP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 HAPLN3Q96S86 360 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 HERPUD2Q9BSE4 406 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 CEP41Q9BYV8 373 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 SLC2A11Q9BYW1 496 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.83□□□□□ -1.48
CPNE3-208ENST00000614678 PARVAQ9NVD7 372 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 LRRK1Q38SD2 2015 aa5.83□□□□□ -1.48
CPNE3-208ENST00000614678 ANKRD36A6QL64 1941 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 C4orf47A7E2U8 309 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 FSBPO95073 299 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PIGNO95427 931 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 WNT1P04628 370 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CFIP05156 583 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SSR1P43307 286 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CNTN1Q12860 1018 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CST6Q15828 149 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 RABGAP1LQ5R372 815 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 DCAF12L1Q5VU92 463 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SDE2Q6IQ49 451 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SND1Q7KZF4 910 aaKnown RBP eCLIP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 STRADAQ7RTN6 431 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ARHGAP12Q8IWW6 846 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 RGL4Q8IZJ4 473 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 TSEN2Q8NCE0 465 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 OR8K1Q8NGG5 319 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 OR2T3Q8NH03 318 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 GANCQ8TET4 914 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 RAPGEF5Q92565 580 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 C1orf74Q96LT6 269 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 GTPBP2Q9BX10 602 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 LACRTQ9GZZ8 138 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SLC12A6Q9UHW9 1150 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SPINT1O43278 529 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CLDN11O75508 207 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 LEFTY1O75610 366 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ATP5BP06576 529 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 RETP07949 1114 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 GZMAP12544 262 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ERCC2P18074 760 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 MAXP61244 160 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SLC10A2Q12908 348 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 MESDQ14696 234 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 UAP1L1Q3KQV9 507 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SEL1L3Q68CR1 1132 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 NPNTQ6UXI9 565 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 HDDC3Q8N4P3 179 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SLC35G2Q8TBE7 412 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 RSPH9Q9H1X1 276 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PILRBQ9UKJ0 227 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 WASF2Q9Y6W5 498 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 TP53BP1Q12888 1972 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PCDH15Q96QU1 1955 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 F5H423 210 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 BUB1O43683 1085 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SLC2A3P11169 496 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 CD6P30203 668 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 HNRNPH3P31942 346 aaKnown RBP5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SCNN1AP37088 669 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 TPM4P67936 248 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 FGL2Q14314 439 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 SLC18A3Q16572 532 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 TMEM139Q8IV31 216 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 PELI3Q8N2H9 469 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 OR14C36Q8NHC7 312 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 C1orf216Q8TAB5 229 aa5.82□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF564Q8TBZ8 553 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms