RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 TSSK4Q6SA08 328 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 LINGO4Q6UY18 593 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 DSG4Q86SJ6 1040 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 NT5DC3Q86UY8 548 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 MAML2Q8IZL2 1156 aaPredicted RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 SH2D3CQ8N5H7 860 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 ATPAF2Q8N5M1 289 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 NPWQ8N729 165 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 ZNF366Q8N895 744 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 TRIM58Q8NG06 486 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 HMGB4Q8WW32 186 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 MYO19Q96H55 970 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 CEP44Q9C0F1 390 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 SP110Q9HB58 689 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 ETNK2Q9NVF9 386 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
MDC1-209ENST00000613547 EBF1Q9UH73 591 aa13.54□□□□□ -0.24
MDC1-209ENST00000613547 C3orf70A6NLC5 250 aaPredicted RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 PRAMEF11O60813 436 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 ACADMP11310 421 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 MX2P20592 715 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 COL9A1P20849 921 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 GLDCP23378 1020 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 CDKN2BP42772 138 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 ARF5P84085 180 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 ELAVL3Q14576 367 aaKnown RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 NCBP2-AS2Q69YL0 99 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 KIAA1211LQ6NV74 962 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 C22orf39Q6P5X5 142 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 MFSD7Q6UXD7 560 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 LONP2Q86WA8 852 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 ARHGAP12Q8IWW6 846 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 OR2T3Q8NH03 318 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 PRCCQ92733 491 aaPredicted RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 KRT35Q92764 455 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 KLC2Q9H0B6 622 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 PRSS16Q9NQE7 514 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 ZSCAN32Q9NX65 697 aa13.53□□□□□ -0.24
MDC1-209ENST00000613547 UBA2Q9UBT2 640 aaPredicted RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 IPO11Q9UI26 975 aaKnown RBP13.53□□□□□ -0.24
MDC1-209ENST00000613547 GOLGA6L9A6NEM1 432 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 H0Y858 1186 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 K7ERQ8 282 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ALOX15BO15296 676 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 MFSD11O43934 449 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 BNIP3LO60238 219 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 SIN3BO75182 1162 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ZNF217O75362 1048 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 MT-CO1P00395 513 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 GABRG2P18507 467 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 CNR2P34972 360 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 MARCKSL1P49006 195 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 PXNP49023 591 aaPredicted RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 FNTBP49356 437 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 DNA2P51530 1060 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ZBTB16Q05516 673 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 IL10RBQ08334 325 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 SFSWAPQ12872 951 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 TMCO4Q5TGY1 634 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 SLC9A4Q6AI14 798 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 KIAA1324Q6UXG2 1013 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 Q6ZVU0 165 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 BZW1Q7L1Q6 419 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 WDR5BQ86VZ2 330 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 TMPRSS6Q8IU80 811 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 PQLC3Q8N755 202 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 PRSS33Q8NF86 280 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 MDGA1Q8NFP4 955 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 FRS2Q8WU20 508 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 OR8D1Q8WZ84 308 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 PTPRN2Q92932 1015 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ISG20Q96AZ6 181 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 ERLEC1Q96DZ1 483 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 SIPA1Q96FS4 1042 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ZNF599Q96NL3 588 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 HAUS2Q9NVX0 235 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 FCF1Q9Y324 198 aaKnown RBP13.52□□□□□ -0.25
MDC1-209ENST00000613547 MFHAS1Q9Y4C4 1052 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 PCDHGA2Q9Y5H1 932 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 KMT2EQ8IZD2 1858 aa13.52□□□□□ -0.25
MDC1-209ENST00000613547 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 hCG_1818297A0A087WSY0 165 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 SMAD6O43541 496 aaKnown RBP13.51□□□□□ -0.25
MDC1-209ENST00000613547 KIF5CO60282 957 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 DNTTP04053 509 aa13.51□□□□□ -0.25
MDC1-209ENST00000613547 TDGF1P13385 188 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms