RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SLC9B1Q4ZJI4 515 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 LIN52Q52LA3 116 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 PPM1LQ5SGD2 360 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 NEPROQ6NW34 567 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 RBM44Q6ZP01 1051 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC26A9Q7LBE3 791 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SHCBP1Q8NEM2 672 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC16A10Q8TF71 515 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TSPAN17Q96FV3 270 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 FAXDC2Q96IV6 333 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 UBE2OQ9C0C9 1292 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 DSEQ9UL01 958 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MYO18AQ92614 2054 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 C15orf38-AP3S2A0A0A6YYH1 394 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SMIM28A0A1B0GU29 152 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 MAGEB16A2A368 324 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 HEATR9A2RTY3 570 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 C9JVG2 144 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NCAM2O15394 837 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 USP2O75604 605 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 BAIAP3O94812 1187 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 C22orf31O95567 290 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC166P0CW27 439 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 GNAZP19086 355 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 GRM5P41594 1212 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NPY2RP49146 381 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 MAXP61244 160 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CDC42EP1Q00587 391 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 RALGDSQ12967 914 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TARBP2Q15633 366 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF618Q5T7W0 954 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SYPL2Q5VXT5 272 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 C16orf87Q6PH81 154 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 OLFML1Q6UWY5 402 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 FRMD7Q6ZUT3 714 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 FRA10AC1Q70Z53 315 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ARPINQ7Z6K5 226 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC117Q8IWD4 279 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 DSELQ8IZU8 1212 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ENDOVQ8N8Q3 282 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CXorf38Q8TB03 319 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CALML6Q8TD86 181 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PTCD3Q96EY7 689 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TRAPPC9Q96Q05 1148 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 OR52B2Q96RD2 323 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 BCO2Q9BYV7 579 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 IL22Q9GZX6 179 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 BAG5Q9UL15 447 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 RAP2CQ9Y3L5 183 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 AP4B1Q9Y6B7 739 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF839A8K0R7 811 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SLCO1B7G3V0H7 640 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 STX16-NPEPL1H3BU86 382 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CCL22O00626 93 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ONECUT3O60422 494 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 H2AFYO75367 372 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NDUFS3O75489 264 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 MT-CYBP00156 380 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PIRTP0C851 137 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NMBRP28336 390 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 EEF1DP29692 281 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CDH5P33151 784 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CCR10P46092 362 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PITX1P78337 314 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC10A2Q12908 348 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC142Q17RM4 750 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC5A9Q2M3M2 681 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SGO1Q5FBB7 561 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 C6orf52Q5T4I8 152 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 AAGABQ6PD74 315 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 GK5Q6ZS86 529 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CLEC4FQ8N1N0 589 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 LPPQ93052 612 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NXNL1Q96CM4 212 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SEPHS2Q99611 448 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 ALG9Q9H6U8 611 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC38A7Q9NVC3 462 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 HACD3Q9P035 362 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TRHDEQ9UKU6 1024 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CNTN6Q9UQ52 1028 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 SMCHD1A6NHR9 2005 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TNS1Q9HBL0 1735 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 KIAA1551Q9HCM1 1747 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NEMP2A6NFY4 417 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM159BA6NKW6 160 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 NFKBIEO00221 500 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PSMD12O00232 456 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 CXCL11O14625 94 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 INPP4BO15327 924 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TOMM70O94826 608 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 RHOBTB1O94844 696 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 TNFAIP8O95379 198 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PRKCHP24723 683 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PPARGP37231 505 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 HADHAP40939 763 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 PSME3P61289 254 aa6.97□□□□□ -1.29
SYNPO2-206ENST00000610556 MPP1Q00013 466 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms